RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	SYCE3	A1L190	88 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	ERVV-2	B6SEH9	535 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888		H7C1W4	665 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	PDIA4	P13667	645 aa	Known RBP	10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	CPA1	P15085	419 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	PSMA5	P28066	241 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	USP48	Q86UV5	1035 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	TICAM2	Q86XR7	235 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	FSD1	Q9BTV5	496 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	PDCL3	Q9H2J4	239 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	HMG20B	Q9P0W2	317 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	DBNL	Q9UJU6	430 aa	Known RBP	10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	SMC3	Q9UQE7	1217 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	TOGARAM1	Q9Y4F4	1720 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	NBPF26	B4DH59	902 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	NBPF14	Q5TI25	921 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	NBPF10	Q6P3W6	841 aa	Known RBP	10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	BRINP3	Q76B58	766 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	UBE3B	Q7Z3V4	1068 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	NBPF15	Q8N660	670 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	MTMR6	Q9Y217	621 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	SOS2	Q07890	1332 aa	Predicted RBP	10.25	□□□□□ -0.77
STRADA-233	ENST00000638888	LAMA4	Q16363	1823 aa		10.25	□□□□□ -0.77
STRADA-233	ENST00000638888		A0A087WZG4	1122 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	GADD45B	O75293	160 aa	Predicted RBP	10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	GJB2	P29033	226 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	TFCP2	Q12800	502 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ME3	Q16798	604 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	RNF20	Q5VTR2	975 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	CCDC83	Q8IWF9	413 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ATP6V1D	Q9Y5K8	247 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	TAF5L	O75529	589 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	PIP4K2A	P48426	406 aa	Predicted RBP	10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	FOXO4	P98177	505 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ANKRD1	Q15327	319 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ZSCAN30	Q86W11	494 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	ZCRB1	Q8TBF4	217 aa	Known RBP	10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	HAUS7	Q99871	368 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	LARP6	Q9BRS8	491 aa	Known RBP	10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	GPR108	Q9NPR9	543 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	TPCN1	Q9ULQ1	816 aa		10.24	□□□□□ -0.77
STRADA-233	ENST00000638888	PALLD	Q8WX93	1383 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	ZNF609	O15014	1411 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	OFD1	O75665	1012 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	PHF14	O94880	888 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	RPS6KB1	P23443	525 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	UBE2H	P62256	183 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	BLOC1S2	Q6QNY1	142 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	TSPY26P	Q9H489	355 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	GDPD2	Q9HCC8	539 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	CNPY2	Q9Y2B0	182 aa		10.23	□□□□□ -0.77
STRADA-233	ENST00000638888	NHSL1	Q5SYE7	1610 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	ATP5J2-PTCD1	G3V325	749 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	PTCD1	O75127	700 aa	Known RBP	10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	PIP4K2B	P78356	416 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	TOB2	Q14106	344 aa	Predicted RBP	10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	KRT32	Q14532	448 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	CCDC183	Q5T5S1	534 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	JARID2	Q92833	1246 aa	Predicted RBP	10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	DBNDD2	Q9BQY9	259 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	CARD10	Q9BWT7	1032 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	SH3TC1	Q8TE82	1336 aa		10.22	□□□□□ -0.77
STRADA-233	ENST00000638888	KCNJ4	P48050	445 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	COL9A3	Q14050	684 aa	Predicted RBP	10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	CSPP1	Q1MSJ5	1256 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	LMBR1L	Q6UX01	489 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	ATG9A	Q7Z3C6	839 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	CCDC191	Q8NCU4	936 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	EDC3	Q96F86	508 aa	Known RBP	10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	ATG3	Q9NT62	314 aa		10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	CWC25	Q9NXE8	425 aa	Predicted RBP	10.21	□□□□□ -0.77
STRADA-233	ENST00000638888	LETM1	O95202	739 aa	Predicted RBP	10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	IL2RB	P14784	551 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	UVSSA	Q2YD98	709 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	TTLL7	Q6ZT98	887 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	KBTBD3	Q8NAB2	608 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	FAM184A	Q8NB25	1140 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	MAP7D2	Q96T17	732 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	PRDM11	Q9NQV5	511 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	SLAIN2	Q9P270	581 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	NOL7	Q9UMY1	257 aa	Known RBP	10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	TAF6L	Q9Y6J9	622 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888		U3KPZ7	1027 aa	Predicted RBP	10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	MYH15	Q9Y2K3	1946 aa		10.21	□□□□□ -0.78
STRADA-233	ENST00000638888	CIAO1	O76071	339 aa		10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	PDC	P20941	246 aa		10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	MCMDC2	Q4G0Z9	681 aa		10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	TOM1L2	Q6ZVM7	507 aa		10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	ITGB4	P16144	1822 aa		10.2	□□□□□ -0.78
STRADA-233	ENST00000638888	TOM1	O60784	492 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	IL15	P40933	162 aa	Predicted RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	DNM1	Q05193	864 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	NECAB1	Q8N987	351 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	DDX54	Q8TDD1	881 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	FUCA2	Q9BTY2	467 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms