RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
SCN8A-215ENST00000638820 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
SCN8A-215ENST00000638820 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
SCN8A-215ENST00000638820 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
SCN8A-215ENST00000638820 ATRNO75882 1429 aa16.16■□□□□ 0.18
SCN8A-215ENST00000638820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.15■□□□□ 0.18
SCN8A-215ENST00000638820 ONECUT3O60422 494 aaPredicted RBP16.15■□□□□ 0.18
SCN8A-215ENST00000638820 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
SCN8A-215ENST00000638820 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 TTC41PQ6P2S7 1318 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 CCDC158Q5M9N0 1113 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 TTLL11Q8NHH1 800 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 RUFY2Q8WXA3 655 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
SCN8A-215ENST00000638820 AKAP2Q9Y2D5 859 aa16.15■□□□□ 0.18
SCN8A-215ENST00000638820 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
SCN8A-215ENST00000638820 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
SCN8A-215ENST00000638820 STAP2Q9UGK3 403 aa16.14■□□□□ 0.17
SCN8A-215ENST00000638820 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
SCN8A-215ENST00000638820 TTC39AQ5SRH9 613 aa16.14■□□□□ 0.17
SCN8A-215ENST00000638820 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 CNTNAP4Q9C0A0 1308 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
SCN8A-215ENST00000638820 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 RFX5P48382 616 aaPredicted RBP16.13■□□□□ 0.17
SCN8A-215ENST00000638820 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
SCN8A-215ENST00000638820 NLRP3Q96P20 1036 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
SCN8A-215ENST00000638820 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
SCN8A-215ENST00000638820 TBC1D9BQ66K14 1250 aa16.12■□□□□ 0.17
SCN8A-215ENST00000638820 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
SCN8A-215ENST00000638820 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
SCN8A-215ENST00000638820 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
SCN8A-215ENST00000638820 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
SCN8A-215ENST00000638820 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
SCN8A-215ENST00000638820 IFIT1P09914 478 aaKnown RBP16.12■□□□□ 0.17
SCN8A-215ENST00000638820 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
SCN8A-215ENST00000638820 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
SCN8A-215ENST00000638820 FRAT2O75474 233 aaPredicted RBP16.11■□□□□ 0.17
SCN8A-215ENST00000638820 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 ERFEQ4G0M1 354 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
SCN8A-215ENST00000638820 AOX1Q06278 1338 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
SCN8A-215ENST00000638820 CHMLP26374 656 aa16.1■□□□□ 0.17
SCN8A-215ENST00000638820 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
SCN8A-215ENST00000638820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
SCN8A-215ENST00000638820 GLI3P10071 1580 aa16.1■□□□□ 0.17
SCN8A-215ENST00000638820 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
SCN8A-215ENST00000638820 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
SCN8A-215ENST00000638820 GOLIM4O00461 696 aa16.1■□□□□ 0.17
SCN8A-215ENST00000638820 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
SCN8A-215ENST00000638820 VPS37DQ86XT2 251 aa16.09■□□□□ 0.17
SCN8A-215ENST00000638820 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
SCN8A-215ENST00000638820 ARFGEF2Q9Y6D5 1785 aa16.09■□□□□ 0.17
SCN8A-215ENST00000638820 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
SCN8A-215ENST00000638820 TAF5LO75529 589 aa16.08■□□□□ 0.17
SCN8A-215ENST00000638820 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.17
SCN8A-215ENST00000638820 ATG9AQ7Z3C6 839 aa16.08■□□□□ 0.17
SCN8A-215ENST00000638820 CNBD1Q8NA66 436 aa16.08■□□□□ 0.17
SCN8A-215ENST00000638820 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.17
SCN8A-215ENST00000638820 HIP1O00291 1037 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 CSF1RP07333 972 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
SCN8A-215ENST00000638820 FBXO41Q8TF61 875 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 CIAO1O76071 339 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 NTSR2O95665 410 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
SCN8A-215ENST00000638820 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 WNK3Q9BYP7 1800 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 NBR1Q14596 966 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
SCN8A-215ENST00000638820 SLC5A1P13866 664 aa16.05■□□□□ 0.16
SCN8A-215ENST00000638820 ADORA1P30542 326 aa16.05■□□□□ 0.16
SCN8A-215ENST00000638820 ATP5JP18859 108 aa16.05■□□□□ 0.16
SCN8A-215ENST00000638820 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
SCN8A-215ENST00000638820 EP400Q96L91 3159 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 SNAP23O00161 211 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 ST18O60284 1047 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
SCN8A-215ENST00000638820 POTEAQ6S8J7 498 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
SCN8A-215ENST00000638820 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 PDE8BO95263 885 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 ST5P78524 1137 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 NFIXQ14938 502 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
SCN8A-215ENST00000638820 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
SCN8A-215ENST00000638820 IDH1O75874 414 aaKnown RBP16.03■□□□□ 0.16
SCN8A-215ENST00000638820 ADRA2BP18089 450 aa16.03■□□□□ 0.16
SCN8A-215ENST00000638820 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms