RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KCNG1Q9UIX4 513 aa14.05□□□□□ -0.16
CAPN3-221ENST00000638141 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 JAKMIP3Q5VZ66 844 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-221ENST00000638141 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 CCDC150Q8NCX0 1101 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 EFCAB13Q8IY85 973 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-221ENST00000638141 LRRN4CLQ8ND94 238 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 TACO1Q9BSH4 297 aaKnown RBP14.04□□□□□ -0.16
CAPN3-221ENST00000638141 TRMT1Q9NXH9 659 aaKnown RBP14.04□□□□□ -0.16
CAPN3-221ENST00000638141 DACT1Q9NYF0 836 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 ARHGEF10O15013 1369 aa14.04□□□□□ -0.16
CAPN3-221ENST00000638141 CCDC196A0A1B0GTZ2 297 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 LMAN1P49257 510 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 ETF1P62495 437 aaKnown RBP14.03□□□□□ -0.16
CAPN3-221ENST00000638141 ARID5BQ14865 1188 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 LRRFIP1Q32MZ4 808 aaKnown RBP14.03□□□□□ -0.16
CAPN3-221ENST00000638141 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
CAPN3-221ENST00000638141 RUFY3Q7L099 469 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 NPHP1O15259 732 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 AK2P54819 239 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 FUT8Q9BYC5 575 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 ARFGAP3Q9NP61 516 aa14.03□□□□□ -0.16
CAPN3-221ENST00000638141 GJB2P29033 226 aa14.02□□□□□ -0.16
CAPN3-221ENST00000638141 CCT4P50991 539 aaKnown RBP14.02□□□□□ -0.16
CAPN3-221ENST00000638141 TRDNQ13061 729 aa14.02□□□□□ -0.16
CAPN3-221ENST00000638141 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.16
CAPN3-221ENST00000638141 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.16
CAPN3-221ENST00000638141 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.16
CAPN3-221ENST00000638141 TOMM22Q9NS69 142 aa14.02□□□□□ -0.16
CAPN3-221ENST00000638141 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
CAPN3-221ENST00000638141 MAP2K7O14733 419 aa14.02□□□□□ -0.17
CAPN3-221ENST00000638141 CTAGE5O15320 804 aa14.02□□□□□ -0.17
CAPN3-221ENST00000638141 PDCP20941 246 aa14.02□□□□□ -0.17
CAPN3-221ENST00000638141 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
CAPN3-221ENST00000638141 CAMK4Q16566 473 aa14.02□□□□□ -0.17
CAPN3-221ENST00000638141 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.17
CAPN3-221ENST00000638141 CRYBG1Q9Y4K1 1723 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 NRDCO43847 1150 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-221ENST00000638141 GPATCH11Q8N954 259 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 TM6SF1Q9BZW5 370 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 FAM107BQ9H098 131 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-221ENST00000638141 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
CAPN3-221ENST00000638141 STX1AQ16623 288 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 SNX14Q9Y5W7 946 aa14.01□□□□□ -0.17
CAPN3-221ENST00000638141 TMEM2Q9UHN6 1383 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 SEC31AO94979 1220 aaKnown RBP14□□□□□ -0.17
CAPN3-221ENST00000638141 LTKP29376 864 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 MEIS3Q99687 375 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 CCDC151A5D8V7 595 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 VPS53Q5VIR6 699 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 CABP2Q9NPB3 220 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 USP16Q9Y5T5 823 aa14□□□□□ -0.17
CAPN3-221ENST00000638141 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
CAPN3-221ENST00000638141 ATP7BP35670 1465 aa13.99□□□□□ -0.17
CAPN3-221ENST00000638141 BRD3Q15059 726 aa13.99□□□□□ -0.17
CAPN3-221ENST00000638141 ANKRD20A12PQ8NF67 263 aa13.99□□□□□ -0.17
CAPN3-221ENST00000638141 RABGGTAQ92696 567 aa13.99□□□□□ -0.17
CAPN3-221ENST00000638141 A0A087WUV0 522 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-221ENST00000638141 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 EVCP57679 992 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 PSME1Q06323 249 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
CAPN3-221ENST00000638141 TXNDC2Q86VQ3 553 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 CNPY4Q8N129 248 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 HNRNPLLQ8WVV9 542 aaKnown RBP13.98□□□□□ -0.17
CAPN3-221ENST00000638141 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 SUFUQ9UMX1 484 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 MYH15Q9Y2K3 1946 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 SGSM2O43147 1006 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 GNAI2P04899 355 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 GNAI3P08754 354 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 MAP2K2P36507 400 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
CAPN3-221ENST00000638141 EGFL6Q8IUX8 553 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 SLIT1O75093 1534 aa13.98□□□□□ -0.17
CAPN3-221ENST00000638141 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-221ENST00000638141 GRIPAP1Q4V328 841 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 TADA2BQ86TJ2 420 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 KCNB2Q92953 911 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 ARHGAP23Q9P227 1491 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 H3BQF6 201 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 SMC2O95347 1197 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 USP8P40818 1118 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
CAPN3-221ENST00000638141 TRIM65Q6PJ69 517 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms