RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
CHRNA7-230ENST00000637649 MPNDQ8N594 471 aa17.23■□□□□ 0.35
CHRNA7-230ENST00000637649 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
CHRNA7-230ENST00000637649 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
CHRNA7-230ENST00000637649 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
CHRNA7-230ENST00000637649 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-230ENST00000637649 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-230ENST00000637649 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
CHRNA7-230ENST00000637649 TAF1P21675 1872 aa17.22■□□□□ 0.35
CHRNA7-230ENST00000637649 YDJCA8MPS7 323 aa17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 H7C1D1 291 aa17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
CHRNA7-230ENST00000637649 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 TRPA1O75762 1119 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 KRT26Q7Z3Y9 468 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
CHRNA7-230ENST00000637649 FAM155AB1AL88 458 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 BBOX1O75936 387 aa17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 LAMB2P55268 1798 aa17.19■□□□□ 0.34
CHRNA7-230ENST00000637649 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 ZNF157P51786 506 aaPredicted RBP17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 C2orf69Q8N8R5 385 aa17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 GBA2Q9HCG7 927 aaPredicted RBP17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
CHRNA7-230ENST00000637649 PSMD14O00487 310 aa17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 EGFRP00533 1210 aa17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 ANXA1P04083 346 aa17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 DDX46Q7L014 1031 aaKnown RBP17.17■□□□□ 0.34
CHRNA7-230ENST00000637649 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
CHRNA7-230ENST00000637649 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
CHRNA7-230ENST00000637649 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 GRAPQ13588 217 aa17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 GRAPLQ8TC17 118 aaPredicted RBP17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 DCPSQ96C86 337 aaKnown RBP17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
CHRNA7-230ENST00000637649 NEFMP07197 916 aa17.14■□□□□ 0.33
CHRNA7-230ENST00000637649 PRPF38BQ5VTL8 546 aaKnown RBP17.14■□□□□ 0.33
CHRNA7-230ENST00000637649 ANKRD36CQ5JPF3 1778 aa17.14■□□□□ 0.33
CHRNA7-230ENST00000637649 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 CTU1Q7Z7A3 348 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 DPF2Q92785 391 aa17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 DUOX1Q9NRD9 1551 aa17.13■□□□□ 0.33
CHRNA7-230ENST00000637649 PDIA6Q15084 440 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 LRP10Q7Z4F1 713 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
CHRNA7-230ENST00000637649 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
CHRNA7-230ENST00000637649 SLC10A3P09131 477 aa17.11■□□□□ 0.33
CHRNA7-230ENST00000637649 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
CHRNA7-230ENST00000637649 ASTN2O75129 1339 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-230ENST00000637649 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 SULF1Q8IWU6 871 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
CHRNA7-230ENST00000637649 ECE2O60344 883 aa17.09■□□□□ 0.33
CHRNA7-230ENST00000637649 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
CHRNA7-230ENST00000637649 XAGE3Q8WTP9 111 aa17.09■□□□□ 0.33
CHRNA7-230ENST00000637649 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
CHRNA7-230ENST00000637649 MKI67P46013 3256 aaKnown RBP17.08■□□□□ 0.33
CHRNA7-230ENST00000637649 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
CHRNA7-230ENST00000637649 GPSM2P81274 684 aa17.08■□□□□ 0.32
CHRNA7-230ENST00000637649 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
CHRNA7-230ENST00000637649 CDCA5Q96FF9 252 aa17.08■□□□□ 0.32
CHRNA7-230ENST00000637649 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
CHRNA7-230ENST00000637649 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
CHRNA7-230ENST00000637649 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
CHRNA7-230ENST00000637649 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
CHRNA7-230ENST00000637649 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
CHRNA7-230ENST00000637649 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
CHRNA7-230ENST00000637649 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms