RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 CCDC77Q9BR77 488 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 SERPINA10Q9UK55 444 aa11.1□□□□□ -0.63
CACNA1A-242ENST00000637485 PTPRCP08575 1304 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 AACSQ86V21 672 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 PANK2Q9BZ23 570 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 ZNF518AQ6AHZ1 1483 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 ZEB2O60315 1214 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 WWC2Q6AWC2 1192 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC174Q6PII3 467 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC172P0C7W6 258 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 UTP14CQ5TAP6 766 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 PPP1R14CQ8TAE6 165 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 A2MP01023 1474 aa11.09□□□□□ -0.63
CACNA1A-242ENST00000637485 KLHL10Q6JEL2 608 aa11.08□□□□□ -0.63
CACNA1A-242ENST00000637485 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.63
CACNA1A-242ENST00000637485 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.63
CACNA1A-242ENST00000637485 TSG101Q99816 390 aa11.08□□□□□ -0.63
CACNA1A-242ENST00000637485 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.63
CACNA1A-242ENST00000637485 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 ZWINTO95229 277 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 ZBTB16Q05516 673 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 ZHX3Q9H4I2 956 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 MYRIPQ8NFW9 859 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 CTAGE9A4FU28 777 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 RLBP1P12271 317 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 RAB3IL1Q8TBN0 382 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 MYL6BP14649 208 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 MCM10Q7L590 875 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 FAM200AQ8TCP9 573 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 PRDM11Q9NQV5 511 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 IKBKGQ9Y6K9 419 aa11.08□□□□□ -0.64
CACNA1A-242ENST00000637485 CIB2O75838 187 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 CTNNBL1Q8WYA6 563 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 DNMT1P26358 1616 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 NDUFAB1O14561 156 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 SIL1Q9H173 461 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 DNA2P51530 1060 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 PHAXQ9H814 394 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 EMILIN1Q9Y6C2 1016 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 MX1P20591 662 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 RASAL2Q9UJF2 1139 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
CACNA1A-242ENST00000637485 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 FERMT3Q86UX7 667 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 MICAL1Q8TDZ2 1067 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 GBP5Q96PP8 586 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 PSMD1Q99460 953 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 THUMPD2Q9BTF0 503 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 IQCGQ9H095 443 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 TEX14Q8IWB6 1497 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 PHACTR2O75167 634 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 ALDH3A1P30838 453 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 TMEM132AQ24JP5 1023 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 CCDC40Q4G0X9 1142 aa11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-242ENST00000637485 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 RRAGDQ9NQL2 400 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 CEP126Q9P2H0 1117 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 CYLC1P35663 651 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 DMTNQ08495 405 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 NEDD9Q14511 834 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 INTS8Q75QN2 995 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 MIER3Q7Z3K6 550 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 TSNARE1Q96NA8 513 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 SELENOSQ9BQE4 189 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 LUC7L3O95232 432 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 TRIM27P14373 513 aa11.05□□□□□ -0.64
CACNA1A-242ENST00000637485 STMN1P16949 149 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms