RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 ZSCAN16Q9H4T2 348 aaPredicted RBP18.97■□□□□ 0.63
CLCN2-215ENST00000636661 SGSM2O43147 1006 aa18.97■□□□□ 0.63
CLCN2-215ENST00000636661 SKILP12757 684 aa18.97■□□□□ 0.63
CLCN2-215ENST00000636661 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
CLCN2-215ENST00000636661 CCDC66A2RUB6 948 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 NCOA7Q8NI08 942 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 ZBTB9Q96C00 473 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 EDC3Q96F86 508 aaKnown RBP18.96■□□□□ 0.63
CLCN2-215ENST00000636661 CCDC43Q96MW1 224 aaKnown RBP18.96■□□□□ 0.63
CLCN2-215ENST00000636661 STIM1Q13586 685 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 AK7Q96M32 723 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 RXRAP19793 462 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
CLCN2-215ENST00000636661 AOPEPQ8N6M6 819 aa18.96■□□□□ 0.63
CLCN2-215ENST00000636661 ZMYND15Q9H091 742 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 USP44Q9H0E7 712 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 ZMYM3Q14202 1370 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 ADAMTS2O95450 1211 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
CLCN2-215ENST00000636661 EIF5P55010 431 aaKnown RBP18.95■□□□□ 0.62
CLCN2-215ENST00000636661 FAM193AP78312 1265 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 HELBQ8NG08 1087 aaPredicted RBP18.95■□□□□ 0.62
CLCN2-215ENST00000636661 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLCN2-215ENST00000636661 BCORL1Q5H9F3 1711 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
CLCN2-215ENST00000636661 KCNQ3O43525 872 aa18.95■□□□□ 0.62
CLCN2-215ENST00000636661 USP5P45974 858 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 SSRP1Q08945 709 aaKnown RBP18.94■□□□□ 0.62
CLCN2-215ENST00000636661 NOM1Q5C9Z4 860 aaKnown RBP18.94■□□□□ 0.62
CLCN2-215ENST00000636661 SOGA3Q5TF21 947 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 TMCO3Q6UWJ1 677 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 RTL1A6NKG5 1358 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 POLR3GO15318 223 aaPredicted RBP18.94■□□□□ 0.62
CLCN2-215ENST00000636661 IGSF3O75054 1194 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 ADGBQ8N7X0 1667 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
CLCN2-215ENST00000636661 RNMTO43148 476 aaKnown RBP18.93■□□□□ 0.62
CLCN2-215ENST00000636661 SLC9C2Q5TAH2 1124 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 MEX3CQ5U5Q3 659 aaKnown RBP18.93■□□□□ 0.62
CLCN2-215ENST00000636661 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 CCDC196A0A1B0GTZ2 297 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 ATP2B3Q16720 1220 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 KIF4BQ2VIQ3 1234 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 CEP135Q66GS9 1140 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 SYKP43405 635 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 SNW1Q13573 536 aaKnown RBP18.93■□□□□ 0.62
CLCN2-215ENST00000636661 PRIMPOLQ96LW4 560 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 ALG1Q9BT22 464 aa18.93■□□□□ 0.62
CLCN2-215ENST00000636661 CTDP1Q9Y5B0 961 aaPredicted RBP18.93■□□□□ 0.62
CLCN2-215ENST00000636661 PTPDC1A2A3K4 754 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
CLCN2-215ENST00000636661 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLCN2-215ENST00000636661 IL17REQ8NFR9 667 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 IP6K1Q92551 441 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 SLC5A1P13866 664 aa18.92■□□□□ 0.62
CLCN2-215ENST00000636661 CTCFLQ8NI51 663 aaPredicted RBP18.92■□□□□ 0.62
CLCN2-215ENST00000636661 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
CLCN2-215ENST00000636661 ZNF445P59923 1031 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 CCDC102BQ68D86 513 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 IQCA1Q86XH1 822 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
CLCN2-215ENST00000636661 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 KIF2AO00139 706 aaPredicted RBP18.91■□□□□ 0.62
CLCN2-215ENST00000636661 PRC1O43663 620 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 UNC5CLQ8IV45 518 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 MKNK2Q9HBH9 465 aa18.91■□□□□ 0.62
CLCN2-215ENST00000636661 ZSCAN12O43309 604 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 IL15P40933 162 aaPredicted RBP18.9■□□□□ 0.62
CLCN2-215ENST00000636661 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 RAD50Q92878 1312 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 CT47A1Q5JQC4 288 aaPredicted RBP18.9■□□□□ 0.62
CLCN2-215ENST00000636661 MFSD6Q6ZSS7 791 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
CLCN2-215ENST00000636661 A0A1B0GVL5 298 aa18.89■□□□□ 0.62
CLCN2-215ENST00000636661 SLC27A2O14975 620 aa18.89■□□□□ 0.62
CLCN2-215ENST00000636661 GSDMDP57764 484 aa18.89■□□□□ 0.62
CLCN2-215ENST00000636661 LEKR1Q6ZMV7 388 aa18.89■□□□□ 0.62
CLCN2-215ENST00000636661 KIAA1328Q86T90 577 aa18.89■□□□□ 0.62
CLCN2-215ENST00000636661 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.62
CLCN2-215ENST00000636661 ZBTB43O43298 467 aa18.89■□□□□ 0.61
CLCN2-215ENST00000636661 DNA2P51530 1060 aa18.89■□□□□ 0.61
CLCN2-215ENST00000636661 UBASH3AP57075 661 aa18.89■□□□□ 0.61
CLCN2-215ENST00000636661 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
CLCN2-215ENST00000636661 BRD1O95696 1058 aa18.88■□□□□ 0.61
CLCN2-215ENST00000636661 AFMP43652 599 aa18.88■□□□□ 0.61
CLCN2-215ENST00000636661 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
CLCN2-215ENST00000636661 HS1BP3Q53T59 392 aa18.88■□□□□ 0.61
CLCN2-215ENST00000636661 CCDC181Q5TID7 509 aa18.88■□□□□ 0.61
CLCN2-215ENST00000636661 TSC1Q92574 1164 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms