RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 PTGER2P43116 358 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 POLA2Q14181 598 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 PPP4R2Q9NY27 417 aa16.67■□□□□ 0.26
CHRNA4-216ENST00000636652 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 PDE6BP35913 854 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 GREM2Q9H772 168 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
CHRNA4-216ENST00000636652 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
CHRNA4-216ENST00000636652 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
CHRNA4-216ENST00000636652 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
CHRNA4-216ENST00000636652 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
CHRNA4-216ENST00000636652 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
CHRNA4-216ENST00000636652 GTF3C3Q9Y5Q9 886 aa16.64■□□□□ 0.25
CHRNA4-216ENST00000636652 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
CHRNA4-216ENST00000636652 ITGA6P23229 1130 aa16.63■□□□□ 0.25
CHRNA4-216ENST00000636652 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
CHRNA4-216ENST00000636652 CCDC136Q96JN2 1154 aa16.63■□□□□ 0.25
CHRNA4-216ENST00000636652 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
CHRNA4-216ENST00000636652 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-216ENST00000636652 CDC5LQ99459 802 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-216ENST00000636652 COPRSQ9NQ92 184 aa16.62■□□□□ 0.25
CHRNA4-216ENST00000636652 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 MYH3P11055 1940 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 SRGNP10124 158 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 NPR1P16066 1061 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 C2CD5Q86YS7 1000 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 CD2APQ9Y5K6 639 aa16.61■□□□□ 0.25
CHRNA4-216ENST00000636652 LRP5O75197 1615 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 H0YIN7 160 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 IGHDP01880 384 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 GRAPQ13588 217 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 MASTLQ96GX5 879 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
CHRNA4-216ENST00000636652 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 IGHMBP2P38935 993 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 TGFB2P61812 414 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 STYK1Q6J9G0 422 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
CHRNA4-216ENST00000636652 CIAO1O76071 339 aa16.58■□□□□ 0.24
CHRNA4-216ENST00000636652 B4GALNT3Q6L9W6 998 aa16.58■□□□□ 0.24
CHRNA4-216ENST00000636652 KLHDC4Q8TBB5 520 aa16.58■□□□□ 0.24
CHRNA4-216ENST00000636652 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
CHRNA4-216ENST00000636652 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
CHRNA4-216ENST00000636652 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 EYA2O00167 538 aa16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 CHRNA5P30532 468 aa16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 ALDH1B1P30837 517 aa16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 CELF1Q92879 486 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 MPHOSPH8Q99549 860 aa16.57■□□□□ 0.24
CHRNA4-216ENST00000636652 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 BBOX1O75936 387 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 SIL1Q9H173 461 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
CHRNA4-216ENST00000636652 DPEP1P16444 411 aa16.55■□□□□ 0.24
CHRNA4-216ENST00000636652 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHRNA4-216ENST00000636652 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
CHRNA4-216ENST00000636652 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
CHRNA4-216ENST00000636652 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 COL4A1P02462 1669 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
CHRNA4-216ENST00000636652 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
CHRNA4-216ENST00000636652 KCNA3P22001 575 aa16.53■□□□□ 0.24
CHRNA4-216ENST00000636652 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms