RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 NEUROD1Q13562 356 aa10.16□□□□□ -0.78
CLN5-204ENST00000635761 MCM6Q14566 821 aa10.16□□□□□ -0.78
CLN5-204ENST00000635761 PKD2L1Q9P0L9 805 aa10.16□□□□□ -0.78
CLN5-204ENST00000635761 FLIIQ13045 1269 aa10.15□□□□□ -0.78
CLN5-204ENST00000635761 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.78
CLN5-204ENST00000635761 PDZRN3Q9UPQ7 1066 aa10.15□□□□□ -0.78
CLN5-204ENST00000635761 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
CLN5-204ENST00000635761 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
CLN5-204ENST00000635761 NME9Q86XW9 330 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLN5-204ENST00000635761 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 PRM3Q9NNZ6 103 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 STK32BQ9NY57 414 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 C5P01031 1676 aa10.14□□□□□ -0.79
CLN5-204ENST00000635761 TNFRSF10AO00220 468 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 IL2RBP14784 551 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 AGERQ15109 404 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 SH3BP5LQ7L8J4 393 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 SYT17Q9BSW7 474 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
CLN5-204ENST00000635761 MTFR1LQ9H019 292 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
CLN5-204ENST00000635761 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
CLN5-204ENST00000635761 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
CLN5-204ENST00000635761 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
CLN5-204ENST00000635761 ACSBG1Q96GR2 724 aa10.12□□□□□ -0.79
CLN5-204ENST00000635761 FHDC1Q9C0D6 1143 aaPredicted RBP10.12□□□□□ -0.79
CLN5-204ENST00000635761 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
CLN5-204ENST00000635761 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
CLN5-204ENST00000635761 EDC4Q6P2E9 1401 aaKnown RBP10.12□□□□□ -0.79
CLN5-204ENST00000635761 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
CLN5-204ENST00000635761 ANKRD24Q8TF21 1146 aa10.11□□□□□ -0.79
CLN5-204ENST00000635761 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
CLN5-204ENST00000635761 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
CLN5-204ENST00000635761 GFRA3O60609 400 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 PTK2Q05397 1052 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
CLN5-204ENST00000635761 SH3RF1Q7Z6J0 888 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 CYP4X1Q8N118 509 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 FAM174AQ8TBP5 190 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 LRRC4BQ9NT99 713 aa10.1□□□□□ -0.79
CLN5-204ENST00000635761 NRG2O14511 850 aaPredicted RBP10.09□□□□□ -0.79
CLN5-204ENST00000635761 IP6K1Q92551 441 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 ARXQ96QS3 562 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 ARHGAP9Q9BRR9 750 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 TERF2IPQ9NYB0 399 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 A0A1W2PP64 1363 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 MAP3K5Q99683 1374 aa10.09□□□□□ -0.79
CLN5-204ENST00000635761 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 TOGARAM1Q9Y4F4 1720 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 ZNF827Q17R98 1081 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
CLN5-204ENST00000635761 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
CLN5-204ENST00000635761 SNIP1Q8TAD8 396 aaKnown RBP10.08□□□□□ -0.8
CLN5-204ENST00000635761 TTC24A2A3L6 582 aaPredicted RBP10.07□□□□□ -0.8
CLN5-204ENST00000635761 SIAH2O43255 324 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 SLC27A3Q5K4L6 730 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
CLN5-204ENST00000635761 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 CARD14Q9BXL6 1004 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
CLN5-204ENST00000635761 GPR37L1O60883 481 aa10.06□□□□□ -0.8
CLN5-204ENST00000635761 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
CLN5-204ENST00000635761 MPNDQ8N594 471 aa10.06□□□□□ -0.8
CLN5-204ENST00000635761 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
CLN5-204ENST00000635761 TESK2Q96S53 571 aa10.06□□□□□ -0.8
CLN5-204ENST00000635761 ANKRD36BQ8N2N9 1353 aa10.05□□□□□ -0.8
CLN5-204ENST00000635761 FBLN1P23142 703 aa10.05□□□□□ -0.8
CLN5-204ENST00000635761 GDPD2Q9HCC8 539 aa10.05□□□□□ -0.8
CLN5-204ENST00000635761 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
CLN5-204ENST00000635761 PNPLA7Q6ZV29 1317 aa10.05□□□□□ -0.8
CLN5-204ENST00000635761 NSD2O96028 1365 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 HOXC9P31274 260 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 KCNQ4P56696 695 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
CLN5-204ENST00000635761 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
CLN5-204ENST00000635761 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
CLN5-204ENST00000635761 MEGF6O75095 1541 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 ST20-MTHFSA0A0A6YYL1 179 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
CLN5-204ENST00000635761 ZCRB1Q8TBF4 217 aaKnown RBP10.03□□□□□ -0.8
CLN5-204ENST00000635761 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 COG3Q96JB2 828 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
CLN5-204ENST00000635761 N4BP2Q86UW6 1770 aaPredicted RBP10.02□□□□□ -0.81
CLN5-204ENST00000635761 RAD21O60216 631 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms