RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 FBXO33Q7Z6M2 555 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 ALKBH8Q96BT7 664 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 DMRTB1Q96MA1 342 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 FAM13BQ9NYF5 915 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 CARMIL2Q6F5E8 1435 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 UGGT2Q9NYU1 1516 aa11.25□□□□□ -0.61
SMARCA2-239ENST00000635388 POTECB2RU33 542 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 ITGA6P23229 1130 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 USP5P45974 858 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 CEP63Q96MT8 703 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 PRXQ9BXM0 1461 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
SMARCA2-239ENST00000635388 A6NHS1 94 aa11.23□□□□□ -0.61
SMARCA2-239ENST00000635388 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
SMARCA2-239ENST00000635388 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
SMARCA2-239ENST00000635388 BRD7Q9NPI1 651 aa11.23□□□□□ -0.61
SMARCA2-239ENST00000635388 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 P4HBP07237 508 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 KCNQ4P56696 695 aa11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 FIGNL1Q6PIW4 674 aa11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
SMARCA2-239ENST00000635388 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-239ENST00000635388 H7C1W4 665 aa11.21□□□□□ -0.61
SMARCA2-239ENST00000635388 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-239ENST00000635388 PCDHGC4Q9Y5F7 938 aa11.21□□□□□ -0.61
SMARCA2-239ENST00000635388 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 EEA1Q15075 1411 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 TNP2Q05952 138 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
SMARCA2-239ENST00000635388 PTPRGP23470 1445 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 DCDC2BA2VCK2 349 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 BNIP3LO60238 219 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 EPB42P16452 691 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 EHHADHQ08426 723 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 SFSWAPQ12872 951 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
SMARCA2-239ENST00000635388 EGFRP00533 1210 aa11.18□□□□□ -0.62
SMARCA2-239ENST00000635388 PCSK2P16519 638 aa11.18□□□□□ -0.62
SMARCA2-239ENST00000635388 TAGLNQ01995 201 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-239ENST00000635388 XKR5Q6UX68 686 aa11.18□□□□□ -0.62
SMARCA2-239ENST00000635388 NIF3L1Q9GZT8 377 aa11.18□□□□□ -0.62
SMARCA2-239ENST00000635388 TTBK1Q5TCY1 1321 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 MAPTP10636 758 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 ZNF16P17020 682 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
SMARCA2-239ENST00000635388 ABCC2Q92887 1545 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 KHNYNO15037 678 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 LAMC2Q13753 1193 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 GRIN2CQ14957 1233 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 GIPC2Q8TF65 315 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 GTPBP3Q969Y2 492 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 ABHD17AQ96GS6 310 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 KCNH4Q9UQ05 1017 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 GOLGA3Q08378 1498 aa11.16□□□□□ -0.62
SMARCA2-239ENST00000635388 TSPOAP1O95153 1857 aa11.15□□□□□ -0.62
SMARCA2-239ENST00000635388 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
SMARCA2-239ENST00000635388 ORC1Q13415 861 aa11.15□□□□□ -0.62
SMARCA2-239ENST00000635388 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-239ENST00000635388 KIF21BO75037 1637 aa11.15□□□□□ -0.62
SMARCA2-239ENST00000635388 UHRF1BP1LA0JNW5 1464 aa11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 ZCCHC11Q5TAX3 1644 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 XYLBO75191 536 aa11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 ATXN7L1Q9ULK2 861 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 FNDC3AQ9Y2H6 1198 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
SMARCA2-239ENST00000635388 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
SMARCA2-239ENST00000635388 TNFRSF21O75509 655 aa11.13□□□□□ -0.63
SMARCA2-239ENST00000635388 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-239ENST00000635388 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-239ENST00000635388 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-239ENST00000635388 MAPK8P45983 427 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 ZNF438Q7Z4V0 828 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 CFHR5Q9BXR6 569 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 GSX2Q9BZM3 304 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
SMARCA2-239ENST00000635388 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms