RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
SRSF4-208ENST00000634348 CTAGE5O15320 804 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 CALCOCO2Q13137 446 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 TFIP11Q9UBB9 837 aaKnown RBP12.92□□□□□ -0.34
SRSF4-208ENST00000634348 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 SYF2O95926 243 aaKnown RBP12.92□□□□□ -0.34
SRSF4-208ENST00000634348 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 RAB3IPQ96QF0 476 aaPredicted RBP12.92□□□□□ -0.34
SRSF4-208ENST00000634348 TXNDC9O14530 226 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 INPP1P49441 399 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 CDKL5O76039 1030 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
SRSF4-208ENST00000634348 A6NNZ2 444 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 MCM10Q7L590 875 aa12.92□□□□□ -0.34
SRSF4-208ENST00000634348 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 NOP2P46087 812 aaKnown RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 GFAPP14136 432 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 SELENOOQ9BVL4 669 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 CCDC65Q8IXS2 484 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 PLVAPQ9BX97 442 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 MKNK2Q9HBH9 465 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 USP25Q9UHP3 1055 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 CCDC172P0C7W6 258 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 TRPC3Q13507 836 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 CFAP157Q5JU67 520 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 GKAP1Q5VSY0 366 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 TMC6Q7Z403 805 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 HVCN1Q96D96 273 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 SPECC1L-ADORA2AF8WAN1 911 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 ARHGEF2Q92974 986 aaKnown RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 BICD1Q96G01 975 aa12.91□□□□□ -0.34
SRSF4-208ENST00000634348 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-208ENST00000634348 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■■■ 50.4
SRSF4-208ENST00000634348 SPATS2Q86XZ4 545 aaKnown RBP12.9□□□□□ -0.34
SRSF4-208ENST00000634348 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 HDXQ7Z353 690 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 THEGQ9P2T0 379 aa12.9□□□□□ -0.34
SRSF4-208ENST00000634348 WIZO95785 1651 aa12.9□□□□□ -0.35
SRSF4-208ENST00000634348 F6X3S4 739 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 TERF1P54274 439 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 ZSCAN25Q6NSZ9 544 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 OPHN1O60890 802 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 SKOR1P84550 965 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 TUBB4AP04350 444 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 AFAP1L1Q8TED9 768 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
SRSF4-208ENST00000634348 LRRD1A4D1F6 860 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 IRX4P78413 519 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 TSHZ3Q63HK5 1081 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 MCUR1Q96AQ8 359 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 PALMDQ9NP74 551 aa12.89□□□□□ -0.35
SRSF4-208ENST00000634348 TUBBP07437 444 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 NACADO15069 1562 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 NOLC1Q14978 699 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 ATP2A1O14983 1001 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 PDCD2Q16342 344 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 SSFA2P28290 1259 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 SDCCAG8Q86SQ7 713 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
SRSF4-208ENST00000634348 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
SRSF4-208ENST00000634348 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms