RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 EIF4G2P78344 907 aaKnown RBP eCLIP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 DPYDQ12882 1025 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 DSC3Q14574 896 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 PRPF38BQ5VTL8 546 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 HDGFL2Q7Z4V5 671 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 LSM14AQ8ND56 463 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 LRRN4Q8WUT4 740 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SERINC2Q96SA4 455 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SIRPGQ9P1W8 387 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 ISY1Q9ULR0 285 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 KCNQ2O43526 872 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SKIP12755 728 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 ATF3P18847 181 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 GEMIN4P57678 1058 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 ALFQ53S48 1182 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 FAM83BQ5T0W9 1011 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 KRT26Q7Z3Y9 468 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SKAP1Q86WV1 359 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 TTC8Q8TAM2 541 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 FAM174AQ8TBP5 190 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 DEPDC7Q96QD5 511 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 PRKD2Q9BZL6 878 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 NGRNQ9NPE2 291 aaKnown RBP5.97□□□□□ -1.45
SDCBP-213ENST00000630925 CYLDQ9NQC7 956 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 LUZP4Q9P127 313 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 HDAC9Q9UKV0 1011 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 TSPOAP1O95153 1857 aa5.96□□□□□ -1.45
SDCBP-213ENST00000630925 FLT3P36888 993 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 MCL1Q07820 350 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 GJC2Q5T442 439 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-213ENST00000630925 VPS37AQ8NEZ2 397 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 FRS2Q8WU20 508 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 GOLGA1Q92805 767 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 CXorf56Q9H5V9 222 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 ZNF408Q9H9D4 720 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 RABGAP1Q9Y3P9 1069 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 GJA3Q9Y6H8 435 aa5.96□□□□□ -1.46
SDCBP-213ENST00000630925 OATP04181 439 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 RPN1P04843 607 aaKnown RBP5.95□□□□□ -1.46
SDCBP-213ENST00000630925 FAM160A1Q05DH4 1040 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 TOMM20Q15388 145 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 KSR2Q6VAB6 950 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 RELL1Q8IUW5 271 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 MYO1HQ8N1T3 1032 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 LILRB2Q8N423 598 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 SETDB2Q96T68 719 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 COL17A1Q9UMD9 1497 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-213ENST00000630925 A0A1W2PRQ8 180 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 APPP05067 770 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 CTSHP09668 335 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 ATICP31939 592 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 PEX19P40855 299 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 TKFCQ3LXA3 575 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 MSL1Q68DK7 614 aa5.95□□□□□ -1.46
SDCBP-213ENST00000630925 ZNF513Q8N8E2 541 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-213ENST00000630925 CDV3Q9UKY7 258 aaKnown RBP5.95□□□□□ -1.46
SDCBP-213ENST00000630925 COLQQ9Y215 455 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-213ENST00000630925 TOP2BQ02880 1626 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 ATP5J2-PTCD1G3V325 749 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 SMAPO00193 183 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 IGHA2P01877 340 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 CD46P15529 392 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 MAPK8P45983 427 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 HYIQ5T013 277 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 ANKRD13DQ6ZTN6 518 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 HOMER1Q86YM7 354 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 HSCBQ8IWL3 235 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 CHCHD4Q8N4Q1 142 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 PRIMPOLQ96LW4 560 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 FEZ1Q99689 392 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 EVLQ9UI08 416 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 ODF2LQ9ULJ1 636 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 CEP170Q5SW79 1584 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 MAGI1Q96QZ7 1491 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 TTLL13PA6NNM8 815 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 KLF4O43474 513 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 PSMC1P62191 440 aaKnown RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 ZBED6P86452 979 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 PTPN12Q05209 780 aaKnown RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 WASHC5Q12768 1159 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 SLC4A8Q2Y0W8 1093 aa5.94□□□□□ -1.46
SDCBP-213ENST00000630925 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 CHMP7Q8WUX9 453 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 ZNF594Q96JF6 807 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 PPRC1Q5VV67 1664 aaKnown RBP5.94□□□□□ -1.46
SDCBP-213ENST00000630925 MAP3K13O43283 966 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 TCEA3O75764 348 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 HSP90AB1P08238 724 aaKnown RBP5.93□□□□□ -1.46
SDCBP-213ENST00000630925 TSPAN7P41732 249 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 EHHADHQ08426 723 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 NFX1Q12986 1120 aaKnown RBP5.93□□□□□ -1.46
SDCBP-213ENST00000630925 PAK2Q13177 524 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 NCOA4Q13772 614 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 UVSSAQ2YD98 709 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 RGL3Q3MIN7 710 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 C16orf54Q6UWD8 224 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms