RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 S1PR4O95977 384 aa8.16□□□□□ -1.1
TCF4-269ENST00000630224 MMP10P09238 476 aa8.16□□□□□ -1.1
TCF4-269ENST00000630224 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
TCF4-269ENST00000630224 MTHFSP49914 203 aa8.16□□□□□ -1.1
TCF4-269ENST00000630224 PKD1L3Q7Z443 1732 aa8.16□□□□□ -1.1
TCF4-269ENST00000630224 LINC00116Q8NCU8 138 aa8.16□□□□□ -1.1
TCF4-269ENST00000630224 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
TCF4-269ENST00000630224 MAP2P11137 1827 aaKnown RBP8.15□□□□□ -1.1
TCF4-269ENST00000630224 KIF13BQ9NQT8 1826 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 KCPQ6ZWJ8 1503 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 PPM1GO15355 546 aaPredicted RBP8.15□□□□□ -1.1
TCF4-269ENST00000630224 DPEP1P16444 411 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 PRELPP51888 382 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 C9orf131Q5VYM1 1079 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 REPIN1Q9BWE0 567 aaKnown RBP8.15□□□□□ -1.1
TCF4-269ENST00000630224 PRKD2Q9BZL6 878 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 RRAGCQ9HB90 399 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 NUDCQ9Y266 331 aa8.15□□□□□ -1.1
TCF4-269ENST00000630224 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.11
TCF4-269ENST00000630224 PCDH11XQ9BZA7 1347 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 PCDH11YQ9BZA8 1340 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 CYP27B1O15528 508 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 HOXA2O43364 376 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 PDE4DQ08499 809 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 ITPK1Q13572 414 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 JMYQ8N9B5 988 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 PIGBQ92521 554 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
TCF4-269ENST00000630224 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 SSFA2P28290 1259 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 SIK1P57059 783 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
TCF4-269ENST00000630224 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
TCF4-269ENST00000630224 SBF1O95248 1867 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
TCF4-269ENST00000630224 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 CENPBP07199 599 aaPredicted RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 HSPA1AP0DMV8 641 aaKnown RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 HSPA1BP0DMV9 641 aaKnown RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
TCF4-269ENST00000630224 RNF181Q9P0P0 153 aa8.12□□□□□ -1.11
TCF4-269ENST00000630224 ASAP1Q9ULH1 1129 aa8.12□□□□□ -1.11
TCF4-269ENST00000630224 EMILIN1Q9Y6C2 1016 aa8.12□□□□□ -1.11
TCF4-269ENST00000630224 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
TCF4-269ENST00000630224 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
TCF4-269ENST00000630224 INSRP06213 1382 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 KIF24Q5T7B8 1368 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 PPEF1O14829 653 aaPredicted RBP8.11□□□□□ -1.11
TCF4-269ENST00000630224 TGFB2P61812 414 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 HNRNPUQ00839 825 aaKnown RBP eCLIP8.11□□□□□ -1.11
TCF4-269ENST00000630224 FSTL1Q12841 308 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 PNNQ9H307 717 aaKnown RBP8.11□□□□□ -1.11
TCF4-269ENST00000630224 CCDC87Q9NVE4 849 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
TCF4-269ENST00000630224 ANKRD26Q9UPS8 1709 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 C10orf71Q711Q0 1435 aa8.11□□□□□ -1.11
TCF4-269ENST00000630224 FLT4P35916 1363 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 U2SURPO15042 1029 aaKnown RBP8.1□□□□□ -1.11
TCF4-269ENST00000630224 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
TCF4-269ENST00000630224 U2AF1Q01081 240 aaKnown RBP eCLIP8.1□□□□□ -1.11
TCF4-269ENST00000630224 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 BRICD5Q6PL45 260 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
TCF4-269ENST00000630224 ADAMTS8Q9UP79 889 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 RTL1A6NKG5 1358 aa8.1□□□□□ -1.11
TCF4-269ENST00000630224 C6orf229H3BNL8 230 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 NEFMP07197 916 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 FDX1P10109 184 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 KCNA3P22001 575 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
TCF4-269ENST00000630224 CHRNA5P30532 468 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 DALRD3Q5D0E6 543 aaKnown RBP8.09□□□□□ -1.11
TCF4-269ENST00000630224 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 SMC1BQ8NDV3 1235 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 HLA-CQ95604 372 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 PIM2Q9P1W9 311 aa8.09□□□□□ -1.11
TCF4-269ENST00000630224 RTCBQ9Y3I0 505 aaKnown RBP8.09□□□□□ -1.11
TCF4-269ENST00000630224 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
TCF4-269ENST00000630224 PLEKHG2Q9H7P9 1386 aa8.09□□□□□ -1.12
TCF4-269ENST00000630224 MS4A1P11836 297 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 GYS1P13807 737 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 RFC4P35249 363 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 SLC19A1P41440 591 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 RASSF7Q02833 373 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms