RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 LPIN3Q9BQK8 851 aa7.46□□□□□ -1.22
CHD2-219ENST00000630016 PPP1R12CQ9BZL4 782 aa7.46□□□□□ -1.22
CHD2-219ENST00000630016 C11orf16Q9NQ32 467 aa7.46□□□□□ -1.22
CHD2-219ENST00000630016 KLK14Q9P0G3 267 aa7.46□□□□□ -1.22
CHD2-219ENST00000630016 FOXO3O43524 673 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 LGR5O75473 907 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 RARAP10276 462 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 INPP5BP32019 993 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 DGKZQ13574 1117 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 LRP8Q14114 963 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 WFDC8Q8IUA0 241 aa7.45□□□□□ -1.22
CHD2-219ENST00000630016 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
CHD2-219ENST00000630016 KRTAP9-6A0A140TA67 174 aa7.44□□□□□ -1.22
CHD2-219ENST00000630016 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
CHD2-219ENST00000630016 GPLD1P80108 840 aa7.44□□□□□ -1.22
CHD2-219ENST00000630016 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
CHD2-219ENST00000630016 VRTNQ9H8Y1 702 aa7.44□□□□□ -1.22
CHD2-219ENST00000630016 PERM1Q5SV97 790 aa7.43□□□□□ -1.22
CHD2-219ENST00000630016 KANK4Q5T7N3 995 aaPredicted RBP7.43□□□□□ -1.22
CHD2-219ENST00000630016 ILDR2Q71H61 639 aa7.43□□□□□ -1.22
CHD2-219ENST00000630016 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
CHD2-219ENST00000630016 SSBP4Q9BWG4 385 aaPredicted RBP7.43□□□□□ -1.22
CHD2-219ENST00000630016 ZFATQ9P243 1243 aa7.43□□□□□ -1.22
CHD2-219ENST00000630016 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
CHD2-219ENST00000630016 GRIK5Q16478 980 aa7.42□□□□□ -1.22
CHD2-219ENST00000630016 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
CHD2-219ENST00000630016 TTC9Q92623 222 aa7.42□□□□□ -1.22
CHD2-219ENST00000630016 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
CHD2-219ENST00000630016 MYO19Q96H55 970 aa7.42□□□□□ -1.22
CHD2-219ENST00000630016 QTRT2Q9H974 415 aaKnown RBP7.42□□□□□ -1.22
CHD2-219ENST00000630016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD2-219ENST00000630016 ZBTB42B2RXF5 422 aa7.41□□□□□ -1.22
CHD2-219ENST00000630016 MICAL2O94851 1124 aa7.41□□□□□ -1.22
CHD2-219ENST00000630016 EIF2AK2P19525 551 aaKnown RBP7.41□□□□□ -1.22
CHD2-219ENST00000630016 TARSP26639 723 aaKnown RBP7.41□□□□□ -1.22
CHD2-219ENST00000630016 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
CHD2-219ENST00000630016 NRLP54845 237 aa7.41□□□□□ -1.22
CHD2-219ENST00000630016 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
CHD2-219ENST00000630016 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
CHD2-219ENST00000630016 SASH3O75995 380 aa7.4□□□□□ -1.22
CHD2-219ENST00000630016 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
CHD2-219ENST00000630016 SMG9Q9H0W8 520 aaKnown RBP7.4□□□□□ -1.22
CHD2-219ENST00000630016 NOS3P29474 1203 aa7.39□□□□□ -1.23
CHD2-219ENST00000630016 WEE1P30291 646 aa7.39□□□□□ -1.23
CHD2-219ENST00000630016 PLAURQ03405 335 aa7.38□□□□□ -1.23
CHD2-219ENST00000630016 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
CHD2-219ENST00000630016 ARXQ96QS3 562 aa7.38□□□□□ -1.23
CHD2-219ENST00000630016 RBSNQ9H1K0 784 aa7.38□□□□□ -1.23
CHD2-219ENST00000630016 TLR7Q9NYK1 1049 aaKnown RBP7.38□□□□□ -1.23
CHD2-219ENST00000630016 RTCBQ9Y3I0 505 aaKnown RBP7.38□□□□□ -1.23
CHD2-219ENST00000630016 A6NJR5 290 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 XYLBO75191 536 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 EGFRP00533 1210 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 GHRHP01286 108 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 PSAPP07602 524 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 FAM200AQ8TCP9 573 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 DCAF11Q8TEB1 546 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 MEGF10Q96KG7 1140 aa7.37□□□□□ -1.23
CHD2-219ENST00000630016 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
CHD2-219ENST00000630016 TREML1Q86YW5 311 aa7.36□□□□□ -1.23
CHD2-219ENST00000630016 KRTAP1-3Q8IUG1 177 aa7.36□□□□□ -1.23
CHD2-219ENST00000630016 RGL4Q8IZJ4 473 aa7.36□□□□□ -1.23
CHD2-219ENST00000630016 CMTR1Q8N1G2 835 aaKnown RBP7.36□□□□□ -1.23
CHD2-219ENST00000630016 PLD4Q96BZ4 506 aa7.36□□□□□ -1.23
CHD2-219ENST00000630016 SRA1Q9HD15 236 aaKnown RBP7.36□□□□□ -1.23
CHD2-219ENST00000630016 NISCHQ9Y2I1 1504 aa7.36□□□□□ -1.23
CHD2-219ENST00000630016 DEAF1O75398 565 aaPredicted RBP7.35□□□□□ -1.23
CHD2-219ENST00000630016 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
CHD2-219ENST00000630016 MRPL18Q9H0U6 180 aaKnown RBP7.35□□□□□ -1.23
CHD2-219ENST00000630016 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
CHD2-219ENST00000630016 LRFN2Q9ULH4 789 aa7.35□□□□□ -1.23
CHD2-219ENST00000630016 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
CHD2-219ENST00000630016 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
CHD2-219ENST00000630016 DLL1O00548 723 aa7.34□□□□□ -1.23
CHD2-219ENST00000630016 OPLAHO14841 1288 aa7.34□□□□□ -1.23
CHD2-219ENST00000630016 SOX18P35713 384 aa7.34□□□□□ -1.23
CHD2-219ENST00000630016 GDF6Q6KF10 455 aaPredicted RBP7.34□□□□□ -1.23
CHD2-219ENST00000630016 NSUN5Q96P11 429 aaKnown RBP7.34□□□□□ -1.23
CHD2-219ENST00000630016 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 J3QW42 95 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 MMP20O60882 483 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 RFX1P22670 979 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 SIK1P57059 783 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 TMEM132AQ24JP5 1023 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
CHD2-219ENST00000630016 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
CHD2-219ENST00000630016 FKBP5Q13451 457 aaPredicted RBP7.32□□□□□ -1.24
CHD2-219ENST00000630016 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
CHD2-219ENST00000630016 IL22RA1Q8N6P7 574 aa7.32□□□□□ -1.24
CHD2-219ENST00000630016 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
CHD2-219ENST00000630016 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 COX20Q5RI15 118 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
CHD2-219ENST00000630016 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 TMEM130Q8N3G9 435 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
CHD2-219ENST00000630016 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
CHD2-219ENST00000630016 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms