RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 HOXB7P09629 217 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 MYL6BP14649 208 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 POLD1P28340 1107 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 PDIA6Q15084 440 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 HDGFL1Q5TGJ6 251 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 LRP10Q7Z4F1 713 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 NGEFQ8N5V2 710 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 ARXQ96QS3 562 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 CHPF2Q9P2E5 772 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 PPP1R1BQ9UD71 204 aaPredicted RBP7.19□□□□□ -1.26
LINC00550-202ENST00000629570 NARFQ9UHQ1 456 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 ERBB4Q15303 1308 aa7.19□□□□□ -1.26
LINC00550-202ENST00000629570 A0A087WZG4 1122 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 ZPR1O75312 459 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 DDR1Q08345 913 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 LAPTM4BQ86VI4 370 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
LINC00550-202ENST00000629570 NLGN1Q8N2Q7 840 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 EPAS1Q99814 870 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 FHDC1Q9C0D6 1143 aaPredicted RBP7.18□□□□□ -1.26
LINC00550-202ENST00000629570 KIAA1468Q9P260 1216 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 BCORQ6W2J9 1755 aa7.18□□□□□ -1.26
LINC00550-202ENST00000629570 SOWAHBA6NEL2 793 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 HNRNPUQ00839 825 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 EXOSC9Q06265 439 aaKnown RBP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 NFIXQ14938 502 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 TWISTNBQ3B726 338 aaPredicted RBP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 TBC1D9BQ66K14 1250 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 ZFRQ96KR1 1074 aaKnown RBP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 ZBTB3Q9H5J0 574 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
LINC00550-202ENST00000629570 SEPT9Q9UHD8 586 aaPredicted RBP7.17□□□□□ -1.26
LINC00550-202ENST00000629570 POLRMTO00411 1230 aaKnown RBP7.16□□□□□ -1.26
LINC00550-202ENST00000629570 TCERG1O14776 1098 aaKnown RBP7.16□□□□□ -1.26
LINC00550-202ENST00000629570 ITGBL1O95965 494 aaPredicted RBP7.16□□□□□ -1.26
LINC00550-202ENST00000629570 TM4SF1P30408 202 aa7.16□□□□□ -1.26
LINC00550-202ENST00000629570 HLFQ16534 295 aa7.16□□□□□ -1.26
LINC00550-202ENST00000629570 XAGE3Q8WTP9 111 aa7.16□□□□□ -1.26
LINC00550-202ENST00000629570 DDX21Q9NR30 783 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC00550-202ENST00000629570 DBF4Q9UBU7 674 aaPredicted RBP7.16□□□□□ -1.26
LINC00550-202ENST00000629570 MAP3K15Q6ZN16 1313 aa7.16□□□□□ -1.26
LINC00550-202ENST00000629570 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
LINC00550-202ENST00000629570 GOLGB1Q14789 3259 aaKnown RBP7.15□□□□□ -1.26
LINC00550-202ENST00000629570 E9PSI1 815 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 AIMP1Q12904 312 aaKnown RBP7.15□□□□□ -1.26
LINC00550-202ENST00000629570 KIF6Q6ZMV9 814 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 COPS6Q7L5N1 327 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 NLGN2Q8NFZ4 835 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 DDX12PQ92771 950 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 SYT17Q9BSW7 474 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 IRX2Q9BZI1 471 aaPredicted RBP7.15□□□□□ -1.26
LINC00550-202ENST00000629570 PARP3Q9Y6F1 533 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 CARMIL3Q8ND23 1372 aa7.15□□□□□ -1.26
LINC00550-202ENST00000629570 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 ERVV-1B6SEH8 477 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 VAMP4O75379 141 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 UBN2Q6ZU65 1347 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
LINC00550-202ENST00000629570 HYPKQ9NX55 129 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 WBP1LQ9NX94 342 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 ATP10DQ9P241 1426 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 NIP7Q9Y221 180 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC00550-202ENST00000629570 ZNF652Q9Y2D9 606 aa7.14□□□□□ -1.27
LINC00550-202ENST00000629570 NRXN2Q9P2S2 1712 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 PXDNLA1KZ92 1463 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 ZBED9Q6R2W3 1325 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 SERPINB2P05120 415 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 GPTP24298 496 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
LINC00550-202ENST00000629570 G2E3Q7L622 706 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 TRMT2AQ8IZ69 625 aaKnown RBP7.13□□□□□ -1.27
LINC00550-202ENST00000629570 CCDC24Q8N4L8 307 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 SETDB2Q96T68 719 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 AFDNP55196 1824 aaKnown RBP7.13□□□□□ -1.27
LINC00550-202ENST00000629570 KIF13BQ9NQT8 1826 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 KIAA1551Q9HCM1 1747 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 UTRNP46939 3433 aa7.13□□□□□ -1.27
LINC00550-202ENST00000629570 ABCC12Q96J65 1359 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 FAM177BA6PVY3 158 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 PRR5LQ6MZQ0 368 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 NBPF5PQ86XG9 351 aaPredicted RBP7.12□□□□□ -1.27
LINC00550-202ENST00000629570 CNBD1Q8NA66 436 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 PLBD2Q8NHP8 589 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 NUP98P52948 1817 aa7.12□□□□□ -1.27
LINC00550-202ENST00000629570 ADCY9O60503 1353 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 ARFGEF2Q9Y6D5 1785 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms