RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 ZNF165P49910 485 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 FOSBP53539 338 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 CCDC144CPQ8IYA2 1237 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 PLA2G4DQ86XP0 818 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 LRRC2Q9BYS8 371 aa22.17■■□□□ 1.14
MECP2-218ENST00000629277 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
MECP2-218ENST00000629277 IGSF3O75054 1194 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 PPFIA3O75145 1194 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 COL15A1P39059 1388 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 ARID5BQ14865 1188 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 AKAP4Q5JQC9 854 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 RNF20Q5VTR2 975 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 CCDC129Q6ZRS4 1044 aa22.16■■□□□ 1.14
MECP2-218ENST00000629277 CACTINQ8WUQ7 758 aaKnown RBP22.16■■□□□ 1.14
MECP2-218ENST00000629277 BRF1Q92994 677 aa22.15■■□□□ 1.14
MECP2-218ENST00000629277 FTOQ9C0B1 505 aaKnown RBP eCLIP22.15■■□□□ 1.14
MECP2-218ENST00000629277 NCBP1Q09161 790 aaKnown RBP22.15■■□□□ 1.14
MECP2-218ENST00000629277 ANKRD1Q15327 319 aa22.15■■□□□ 1.14
MECP2-218ENST00000629277 DDX19AQ9NUU7 478 aaKnown RBP22.15■■□□□ 1.14
MECP2-218ENST00000629277 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
MECP2-218ENST00000629277 MED23Q9ULK4 1368 aa22.14■■□□□ 1.14
MECP2-218ENST00000629277 HIP1O00291 1037 aa22.14■■□□□ 1.14
MECP2-218ENST00000629277 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.14
MECP2-218ENST00000629277 TAF5LO75529 589 aa22.14■■□□□ 1.14
MECP2-218ENST00000629277 RBM43Q6ZSC3 357 aaKnown RBP22.14■■□□□ 1.14
MECP2-218ENST00000629277 SEC62Q99442 399 aaKnown RBP22.14■■□□□ 1.14
MECP2-218ENST00000629277 CLIP2Q9UDT6 1046 aa22.14■■□□□ 1.14
MECP2-218ENST00000629277 EPHA10Q5JZY3 1008 aa22.14■■□□□ 1.13
MECP2-218ENST00000629277 SNRKQ9NRH2 765 aa22.14■■□□□ 1.13
MECP2-218ENST00000629277 TNNT1P13805 278 aa22.13■■□□□ 1.13
MECP2-218ENST00000629277 KLHL34Q8N239 644 aa22.13■■□□□ 1.13
MECP2-218ENST00000629277 TDRD7Q8NHU6 1098 aaKnown RBP22.13■■□□□ 1.13
MECP2-218ENST00000629277 IGKV5-2P06315 115 aa22.13■■□□□ 1.13
MECP2-218ENST00000629277 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
MECP2-218ENST00000629277 PXDNQ92626 1479 aa22.13■■□□□ 1.13
MECP2-218ENST00000629277 RESTQ13127 1097 aa22.12■■□□□ 1.13
MECP2-218ENST00000629277 Q6ZUG5 572 aa22.12■■□□□ 1.13
MECP2-218ENST00000629277 C11orf57Q6ZUT1 292 aaPredicted RBP22.12■■□□□ 1.13
MECP2-218ENST00000629277 GTF3C6Q969F1 213 aa22.12■■□□□ 1.13
MECP2-218ENST00000629277 CCDC9Q9Y3X0 531 aaKnown RBP22.12■■□□□ 1.13
MECP2-218ENST00000629277 HSP90B1P14625 803 aaKnown RBP22.11■■□□□ 1.13
MECP2-218ENST00000629277 ZNF592Q92610 1267 aa22.11■■□□□ 1.13
MECP2-218ENST00000629277 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 USP27XA6NNY8 438 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 H3BQV1 296 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 MYL6BP14649 208 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
MECP2-218ENST00000629277 IFFO2Q5TF58 517 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 ERCC4Q92889 916 aaPredicted RBP22.1■■□□□ 1.13
MECP2-218ENST00000629277 SLFNL1Q499Z3 407 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 UTP14CQ5TAP6 766 aaKnown RBP22.1■■□□□ 1.13
MECP2-218ENST00000629277 PHF8Q9UPP1 1060 aa22.1■■□□□ 1.13
MECP2-218ENST00000629277 TPD52L1Q16890 204 aaPredicted RBP22.09■■□□□ 1.13
MECP2-218ENST00000629277 NEK1Q96PY6 1258 aa22.09■■□□□ 1.13
MECP2-218ENST00000629277 PIP4K2AP48426 406 aaPredicted RBP22.09■■□□□ 1.13
MECP2-218ENST00000629277 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
MECP2-218ENST00000629277 PDIA6Q15084 440 aa22.09■■□□□ 1.13
MECP2-218ENST00000629277 FBXW7Q969H0 707 aa22.09■■□□□ 1.13
MECP2-218ENST00000629277 DBNLQ9UJU6 430 aaKnown RBP22.09■■□□□ 1.13
MECP2-218ENST00000629277 SCRN1Q12765 414 aa22.08■■□□□ 1.13
MECP2-218ENST00000629277 RIC3Q7Z5B4 369 aa22.08■■□□□ 1.13
MECP2-218ENST00000629277 DNAJC2Q99543 621 aaKnown RBP22.08■■□□□ 1.13
MECP2-218ENST00000629277 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.13
MECP2-218ENST00000629277 CYP21A2P08686 494 aa22.08■■□□□ 1.12
MECP2-218ENST00000629277 ALDH8A1Q9H2A2 487 aaPredicted RBP22.08■■□□□ 1.12
MECP2-218ENST00000629277 USP16Q9Y5T5 823 aa22.08■■□□□ 1.12
MECP2-218ENST00000629277 GOLPH3LQ9H4A5 285 aa22.07■■□□□ 1.12
MECP2-218ENST00000629277 HMG20BQ9P0W2 317 aa22.07■■□□□ 1.12
MECP2-218ENST00000629277 SMTNL1A8MU46 457 aa22.07■■□□□ 1.12
MECP2-218ENST00000629277 IQCB1Q15051 598 aa22.07■■□□□ 1.12
MECP2-218ENST00000629277 TSGA10IPQ3SY00 556 aa22.07■■□□□ 1.12
MECP2-218ENST00000629277 UTYO14607 1347 aa22.06■■□□□ 1.12
MECP2-218ENST00000629277 PDIA4P13667 645 aaKnown RBP22.06■■□□□ 1.12
MECP2-218ENST00000629277 TFCP2Q12800 502 aa22.06■■□□□ 1.12
MECP2-218ENST00000629277 USPL1Q5W0Q7 1092 aa22.06■■□□□ 1.12
MECP2-218ENST00000629277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.06■■□□□ 1.12
MECP2-218ENST00000629277 ANKARQ7Z5J8 1434 aa22.06■■□□□ 1.12
MECP2-218ENST00000629277 LTN1O94822 1766 aa22.06■■□□□ 1.12
MECP2-218ENST00000629277 ADD1P35611 737 aaKnown RBP22.05■■□□□ 1.12
MECP2-218ENST00000629277 STOX1Q6ZVD7 989 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 ADGRL3Q9HAR2 1447 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 DDX46Q7L014 1031 aaKnown RBP22.05■■□□□ 1.12
MECP2-218ENST00000629277 LRRC8AQ8IWT6 810 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 MYD88Q99836 296 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 JCADQ9P266 1359 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 HEG1Q9ULI3 1381 aa22.05■■□□□ 1.12
MECP2-218ENST00000629277 RGPD2P0DJD1 1756 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 A0A0G2JLW4 131 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 FGD1P98174 961 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 FILIP1Q7Z7B0 1213 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
MECP2-218ENST00000629277 CCDC112Q8NEF3 446 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 DDX21Q9NR30 783 aaKnown RBP eCLIP22.04■■□□□ 1.12
MECP2-218ENST00000629277 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.04■■□□□ 1.12
MECP2-218ENST00000629277 HDAC5Q9UQL6 1122 aa22.04■■□□□ 1.12
MECP2-218ENST00000629277 V9GYY5 206 aaPredicted RBP22.04■■□□□ 1.12
MECP2-218ENST00000629277 ZNF609O15014 1411 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms