RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 NOM1Q5C9Z4 860 aaKnown RBP4.66□□□□□ -1.66
SCARNA4-201ENST00000629045 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
SCARNA4-201ENST00000629045 NUDT16Q96DE0 195 aaKnown RBP4.66□□□□□ -1.66
SCARNA4-201ENST00000629045 SLC6A14Q9UN76 642 aa4.66□□□□□ -1.66
SCARNA4-201ENST00000629045 MTMR7Q9Y216 660 aa4.66□□□□□ -1.66
SCARNA4-201ENST00000629045 MMP20O60882 483 aa4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 ARID4AP29374 1257 aaPredicted RBP4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 GSK3AP49840 483 aa4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 HFE2Q6ZVN8 426 aa4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 DHX32Q7L7V1 743 aaKnown RBP4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 PODNQ7Z5L7 613 aa4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 PIK3R5Q8WYR1 880 aa4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 NSUN5Q96P11 429 aaKnown RBP4.65□□□□□ -1.67
SCARNA4-201ENST00000629045 ZBTB42B2RXF5 422 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 RNF225M0QZC1 329 aaPredicted RBP4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 M0R082 166 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 ICMTO60725 284 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 MAP3K6O95382 1288 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 EGFRP00533 1210 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 PDGFAP04085 211 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 CPB1P15086 417 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 ALAS2P22557 587 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 FKBP4Q02790 459 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 AAMPQ13685 434 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 TXNDC2Q86VQ3 553 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 GLYCTKQ8IVS8 523 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 ZNF417Q8TAU3 575 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 NUDT8Q8WV74 236 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 SCARF2Q96GP6 870 aaPredicted RBP4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 ZNF587Q96SQ5 575 aaPredicted RBP4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 SUV39H2Q9H5I1 410 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 CCDC87Q9NVE4 849 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 FAM13BQ9NYF5 915 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 MKL2Q9ULH7 1088 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 POLIQ9UNA4 740 aa4.64□□□□□ -1.67
SCARNA4-201ENST00000629045 FZD6O60353 706 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 FAM13AO94988 1023 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 CYP2E1P05181 493 aaPredicted RBP4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 NPR3P17342 541 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 GPLD1P80108 840 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 PLAURQ03405 335 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 SF3B2Q13435 895 aaKnown RBP4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 C8orf34Q49A92 452 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 PSAPL1Q6NUJ1 521 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 LINC00114Q6XXX2 140 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 FAM35AQ86V20 835 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 NLRP13Q86W25 1043 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 TRIM11Q96F44 468 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 GGNBP2Q9H3C7 697 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 EFCC1Q9HA90 598 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 JPH1Q9HDC5 661 aaPredicted RBP4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 TLR7Q9NYK1 1049 aaKnown RBP4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 TMEM63CQ9P1W3 806 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 EGFL7Q9UHF1 273 aa4.63□□□□□ -1.67
SCARNA4-201ENST00000629045 PHF20L1A8MW92 1017 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 J3QW42 95 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 BRD1O95696 1058 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 PSAPP07602 524 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 EIF2AK2P19525 551 aaKnown RBP4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 COL8A1P27658 744 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 MZF1P28698 734 aaPredicted RBP4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 NRLP54845 237 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 ARHGAP4P98171 946 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 RASSF7Q02833 373 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 PDE4CQ08493 712 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 ECM1Q16610 540 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 PERM1Q5SV97 790 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 COL13A1Q5TAT6 717 aaPredicted RBP4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 ALKBH2Q6NS38 261 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 KANK3Q6NY19 840 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 C20orf204Q6ZNR8 217 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 ZNF438Q7Z4V0 828 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 MICALL1Q8N3F8 863 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 BEND7Q8N7W2 519 aaPredicted RBP4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 TRPM4Q8TD43 1214 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 LPIN3Q9BQK8 851 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 C11orf16Q9NQ32 467 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 KANSL3Q9P2N6 904 aa4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.62□□□□□ -1.67
SCARNA4-201ENST00000629045 GNB5O14775 395 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 KCNMA1Q12791 1236 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 COL9A3Q14050 684 aaPredicted RBP4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 OR13H1Q8NG92 308 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 CCER1Q8TC90 406 aaPredicted RBP4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 ELP3Q9H9T3 547 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 ABI2Q9NYB9 513 aaPredicted RBP4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 CNTN3Q9P232 1028 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 FNDC3AQ9Y2H6 1198 aaKnown RBP4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 IVNS1ABPQ9Y6Y0 642 aa4.61□□□□□ -1.67
SCARNA4-201ENST00000629045 SOWAHDA6NJG2 315 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 FAM229AH3BQW9 127 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 LILRB5O75023 590 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 NID1P14543 1247 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 PCSK2P16519 638 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 SOX18P35713 384 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 AFF1P51825 1210 aaKnown RBP4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 ATP11AP98196 1134 aa4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 TTC39BQ5VTQ0 682 aaPredicted RBP4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 PDE12Q6L8Q7 609 aaKnown RBP4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 PLVAPQ9BX97 442 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms