RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 ZC3H6P61129 1189 aaKnown RBP22.8■■□□□ 1.24
PTBP1-220ENST00000627714 TNNI3KQ59H18 835 aa22.8■■□□□ 1.24
PTBP1-220ENST00000627714 PROSER2Q86WR7 435 aaPredicted RBP22.8■■□□□ 1.24
PTBP1-220ENST00000627714 SCAND2PQ9GZW5 306 aaPredicted RBP22.8■■□□□ 1.24
PTBP1-220ENST00000627714 FPGT-TNNI3KV9GXZ4 949 aa22.8■■□□□ 1.24
PTBP1-220ENST00000627714 MEGF6O75095 1541 aa22.8■■□□□ 1.24
PTBP1-220ENST00000627714 KLHDC4Q8TBB5 520 aa22.8■■□□□ 1.24
PTBP1-220ENST00000627714 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
PTBP1-220ENST00000627714 CCDC192P0DO97 292 aa22.79■■□□□ 1.24
PTBP1-220ENST00000627714 PTPN12Q05209 780 aaKnown RBP22.79■■□□□ 1.24
PTBP1-220ENST00000627714 TOB2Q14106 344 aaPredicted RBP22.79■■□□□ 1.24
PTBP1-220ENST00000627714 ZNF589Q86UQ0 364 aaPredicted RBP22.79■■□□□ 1.24
PTBP1-220ENST00000627714 TICAM2Q86XR7 235 aa22.79■■□□□ 1.24
PTBP1-220ENST00000627714 GIMAP6Q6P9H5 292 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 SASS6Q6UVJ0 657 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 DDX54Q8TDD1 881 aaKnown RBP22.78■■□□□ 1.24
PTBP1-220ENST00000627714 DBNLQ9UJU6 430 aaKnown RBP22.78■■□□□ 1.24
PTBP1-220ENST00000627714 U3KPZ7 1027 aaPredicted RBP22.78■■□□□ 1.24
PTBP1-220ENST00000627714 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 COL18A1P39060 1754 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 PKD1L3Q7Z443 1732 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 CDC37L1Q7L3B6 337 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 PDCL3Q9H2J4 239 aa22.78■■□□□ 1.24
PTBP1-220ENST00000627714 LAMB4A4D0S4 1761 aa22.77■■□□□ 1.24
PTBP1-220ENST00000627714 TPM3P06753 285 aa22.77■■□□□ 1.24
PTBP1-220ENST00000627714 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
PTBP1-220ENST00000627714 PIBF1Q8WXW3 757 aa22.77■■□□□ 1.24
PTBP1-220ENST00000627714 TFCP2Q12800 502 aa22.76■■□□□ 1.23
PTBP1-220ENST00000627714 NEK1Q96PY6 1258 aa22.75■■□□□ 1.23
PTBP1-220ENST00000627714 MAP7D2Q96T17 732 aa22.75■■□□□ 1.23
PTBP1-220ENST00000627714 HAUS7Q99871 368 aa22.75■■□□□ 1.23
PTBP1-220ENST00000627714 USP16Q9Y5T5 823 aa22.75■■□□□ 1.23
PTBP1-220ENST00000627714 PARP4Q9UKK3 1724 aaKnown RBP22.74■■□□□ 1.23
PTBP1-220ENST00000627714 UQCRHLA0A096LP55 91 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 DYNC1I1O14576 645 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 UQCRHP07919 91 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 MAP3K11Q16584 847 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 UBE3BQ7Z3V4 1068 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 PLBD2Q8NHP8 589 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 NUP62CLQ9H1M0 184 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 TPRNQ4KMQ1 711 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 GTF3C6Q969F1 213 aa22.74■■□□□ 1.23
PTBP1-220ENST00000627714 MCMDC2Q4G0Z9 681 aa22.73■■□□□ 1.23
PTBP1-220ENST00000627714 A0A087WZG4 1122 aa22.73■■□□□ 1.23
PTBP1-220ENST00000627714 CSB-PGBD3P0DP91 1061 aa22.73■■□□□ 1.23
PTBP1-220ENST00000627714 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
PTBP1-220ENST00000627714 DDX19AQ9NUU7 478 aaKnown RBP22.73■■□□□ 1.23
PTBP1-220ENST00000627714 TAF6LQ9Y6J9 622 aa22.73■■□□□ 1.23
PTBP1-220ENST00000627714 ZNF609O15014 1411 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 DCCP43146 1447 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 GOLGA6L4A6NEF3 574 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 HMGB1P09429 215 aaKnown RBP22.72■■□□□ 1.23
PTBP1-220ENST00000627714 FERMT3Q86UX7 667 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 SPATA32Q96LK8 384 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 TCEANC2Q96MN5 208 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 SH3TC1Q8TE82 1336 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 CASP7P55210 303 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 FAM200AQ8TCP9 573 aa22.72■■□□□ 1.23
PTBP1-220ENST00000627714 EDC3Q96F86 508 aaKnown RBP22.72■■□□□ 1.23
PTBP1-220ENST00000627714 PALLDQ8WX93 1383 aa22.71■■□□□ 1.23
PTBP1-220ENST00000627714 COL9A3Q14050 684 aaPredicted RBP22.71■■□□□ 1.23
PTBP1-220ENST00000627714 GOLGA6L6A8MZA4 724 aa22.7■■□□□ 1.23
PTBP1-220ENST00000627714 CYP27B1O15528 508 aa22.7■■□□□ 1.23
PTBP1-220ENST00000627714 GPR108Q9NPR9 543 aa22.7■■□□□ 1.23
PTBP1-220ENST00000627714 GLI3P10071 1580 aa22.7■■□□□ 1.22
PTBP1-220ENST00000627714 CABP4P57796 275 aa22.7■■□□□ 1.22
PTBP1-220ENST00000627714 MTERF4Q7Z6M4 381 aaKnown RBP22.7■■□□□ 1.22
PTBP1-220ENST00000627714 KBTBD3Q8NAB2 608 aa22.7■■□□□ 1.22
PTBP1-220ENST00000627714 DBNDD2Q9BQY9 259 aa22.7■■□□□ 1.22
PTBP1-220ENST00000627714 ZSCAN16Q9H4T2 348 aaPredicted RBP22.7■■□□□ 1.22
PTBP1-220ENST00000627714 ATF3P18847 181 aa22.69■■□□□ 1.22
PTBP1-220ENST00000627714 NOLC1Q14978 699 aaKnown RBP eCLIP22.69■■□□□ 1.222e-6■■□□□ 11.7
PTBP1-220ENST00000627714 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
PTBP1-220ENST00000627714 PRIMPOLQ96LW4 560 aa22.69■■□□□ 1.22
PTBP1-220ENST00000627714 DNAJC2Q99543 621 aaKnown RBP22.69■■□□□ 1.22
PTBP1-220ENST00000627714 LLPHQ9BRT6 129 aaKnown RBP22.69■■□□□ 1.22
PTBP1-220ENST00000627714 SPTLC3Q9NUV7 552 aa22.69■■□□□ 1.22
PTBP1-220ENST00000627714 DTNBO60941 627 aa22.68■■□□□ 1.22
PTBP1-220ENST00000627714 HMGN5P82970 282 aaKnown RBP22.68■■□□□ 1.22
PTBP1-220ENST00000627714 STK3Q13188 491 aa22.68■■□□□ 1.22
PTBP1-220ENST00000627714 RBM43Q6ZSC3 357 aaKnown RBP22.68■■□□□ 1.22
PTBP1-220ENST00000627714 TNMDQ9H2S6 317 aa22.68■■□□□ 1.22
PTBP1-220ENST00000627714 CYP21A2P08686 494 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 LIG1P18858 919 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 TYRO3Q06418 890 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 Q6ZUG5 572 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 HELLSQ9NRZ9 838 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 TMEM94Q12767 1356 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 H7C1W4 665 aa22.67■■□□□ 1.22
PTBP1-220ENST00000627714 DNTTIP2Q5QJE6 756 aaKnown RBP22.67■■□□□ 1.22
PTBP1-220ENST00000627714 TTC12Q9H892 705 aaPredicted RBP22.67■■□□□ 1.22
PTBP1-220ENST00000627714 ATP5J2-PTCD1G3V325 749 aa22.66■■□□□ 1.22
PTBP1-220ENST00000627714 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
PTBP1-220ENST00000627714 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
PTBP1-220ENST00000627714 LMBR1LQ6UX01 489 aa22.66■■□□□ 1.22
PTBP1-220ENST00000627714 CLSTN2Q9H4D0 955 aa22.66■■□□□ 1.22
PTBP1-220ENST00000627714 DACT1Q9NYF0 836 aa22.66■■□□□ 1.22
PTBP1-220ENST00000627714 CFAP45Q9UL16 551 aa22.66■■□□□ 1.22
PTBP1-220ENST00000627714 FAM173BQ6P4H8 233 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms