RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SPTAN1-212ENST00000627441 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-212ENST00000627441 CD99L2Q8TCZ2 262 aa11.37□□□□□ -0.59
SPTAN1-212ENST00000627441 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
SPTAN1-212ENST00000627441 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
SPTAN1-212ENST00000627441 TAF1P21675 1872 aa11.37□□□□□ -0.59
SPTAN1-212ENST00000627441 A1BGP04217 495 aa11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 MTMR10Q9NXD2 777 aa11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 LAMB1P07942 1786 aa11.36□□□□□ -0.59
SPTAN1-212ENST00000627441 UBE2Q2LH0YL09 131 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 AMOTQ4VCS5 1084 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 TESK2Q96S53 571 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 GGA3Q9NZ52 723 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
SPTAN1-212ENST00000627441 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 PRAMEF22A3QJZ6 481 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 H7C1D1 291 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 SLC4A8Q2Y0W8 1093 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
SPTAN1-212ENST00000627441 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-212ENST00000627441 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
SPTAN1-212ENST00000627441 FAM122AQ96E09 287 aa11.33□□□□□ -0.6
SPTAN1-212ENST00000627441 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
SPTAN1-212ENST00000627441 LAMB2P55268 1798 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 ZBTB7BO15156 539 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 RNMTO43148 476 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 STARD3NLO95772 234 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 ZNF496Q96IT1 587 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 STAP2Q9UGK3 403 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 PTCH2Q9Y6C5 1203 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 NUP98P52948 1817 aa11.32□□□□□ -0.6
SPTAN1-212ENST00000627441 ZNF646O15015 1829 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-212ENST00000627441 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
SPTAN1-212ENST00000627441 PSMD14O00487 310 aa11.31□□□□□ -0.6
SPTAN1-212ENST00000627441 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
SPTAN1-212ENST00000627441 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
SPTAN1-212ENST00000627441 HEG1Q9ULI3 1381 aa11.3□□□□□ -0.6
SPTAN1-212ENST00000627441 TNIP1Q15025 636 aa11.3□□□□□ -0.6
SPTAN1-212ENST00000627441 KIF4BQ2VIQ3 1234 aa11.3□□□□□ -0.6
SPTAN1-212ENST00000627441 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
SPTAN1-212ENST00000627441 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
SPTAN1-212ENST00000627441 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTAN1-212ENST00000627441 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
SPTAN1-212ENST00000627441 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
SPTAN1-212ENST00000627441 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
SPTAN1-212ENST00000627441 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
SPTAN1-212ENST00000627441 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 HLFQ16534 295 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 UBE2Q1Q7Z7E8 422 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 GUCD1Q96NT3 240 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 SIN3AQ96ST3 1273 aa11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-212ENST00000627441 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 FKBP1BP68106 108 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 DPF2Q92785 391 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 SNX27Q96L92 541 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 KIF7Q2M1P5 1343 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 RPTORQ8N122 1335 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 RTL9Q8NET4 1388 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 CDH23Q9H251 3354 aa11.27□□□□□ -0.61
SPTAN1-212ENST00000627441 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 BCAMP50895 628 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 MTFR1Q15390 333 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 SULT6B1Q6IMI4 303 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 IFNL1Q8IU54 200 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
SPTAN1-212ENST00000627441 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 CRHR2Q13324 411 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 TTC5Q8N0Z6 440 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 CRAMP1Q96RY5 1269 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 FZD1Q9UP38 647 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
SPTAN1-212ENST00000627441 PSME4Q14997 1843 aa11.24□□□□□ -0.61
SPTAN1-212ENST00000627441 TMEM265A0A087WTH1 108 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms