RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 UBE3BQ7Z3V4 1068 aa24.01■■□□□ 1.43
CNOT9-209ENST00000627282 TNRC6CQ9HCJ0 1690 aaKnown RBP24■■□□□ 1.43
CNOT9-209ENST00000627282 RIC1Q4ADV7 1423 aa24■■□□□ 1.43
CNOT9-209ENST00000627282 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
CNOT9-209ENST00000627282 IRS4O14654 1257 aaPredicted RBP23.99■■□□□ 1.43
CNOT9-209ENST00000627282 SRGNP10124 158 aa23.99■■□□□ 1.43
CNOT9-209ENST00000627282 C3orf67Q6ZVT6 689 aa23.99■■□□□ 1.43
CNOT9-209ENST00000627282 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
CNOT9-209ENST00000627282 CDHR2Q9BYE9 1310 aa23.99■■□□□ 1.43
CNOT9-209ENST00000627282 KLRG2A4D1S0 409 aaPredicted RBP23.99■■□□□ 1.43
CNOT9-209ENST00000627282 ZNF622Q969S3 477 aaKnown RBP eCLIP23.99■■□□□ 1.43
CNOT9-209ENST00000627282 C9orf78Q9NZ63 289 aaPredicted RBP23.99■■□□□ 1.43
CNOT9-209ENST00000627282 DDX60Q8IY21 1712 aaKnown RBP23.98■■□□□ 1.43
CNOT9-209ENST00000627282 UTYO14607 1347 aa23.98■■□□□ 1.43
CNOT9-209ENST00000627282 NBPF7P0C2Y1 421 aaPredicted RBP23.98■■□□□ 1.43
CNOT9-209ENST00000627282 STYK1Q6J9G0 422 aa23.98■■□□□ 1.43
CNOT9-209ENST00000627282 MASTLQ96GX5 879 aa23.96■■□□□ 1.43
CNOT9-209ENST00000627282 MVPQ14764 893 aaKnown RBP23.95■■□□□ 1.43
CNOT9-209ENST00000627282 LAMB2P55268 1798 aa23.95■■□□□ 1.43
CNOT9-209ENST00000627282 CRY2Q49AN0 593 aa23.95■■□□□ 1.42
CNOT9-209ENST00000627282 ITPRIPQ8IWB1 547 aa23.95■■□□□ 1.42
CNOT9-209ENST00000627282 CNKSR1Q969H4 720 aa23.95■■□□□ 1.42
CNOT9-209ENST00000627282 MEIS3Q99687 375 aa23.95■■□□□ 1.42
CNOT9-209ENST00000627282 NPR1P16066 1061 aa23.94■■□□□ 1.42
CNOT9-209ENST00000627282 NLRP3Q96P20 1036 aa23.94■■□□□ 1.42
CNOT9-209ENST00000627282 PDE8AO60658 829 aa23.93■■□□□ 1.42
CNOT9-209ENST00000627282 KAZALD1Q96I82 304 aa23.93■■□□□ 1.42
CNOT9-209ENST00000627282 SUCLG2Q96I99 432 aa23.93■■□□□ 1.42
CNOT9-209ENST00000627282 PLA2G12BQ9BX93 195 aa23.93■■□□□ 1.42
CNOT9-209ENST00000627282 EPHA10Q5JZY3 1008 aa23.92■■□□□ 1.42
CNOT9-209ENST00000627282 PRPF40BQ6NWY9 871 aaKnown RBP23.92■■□□□ 1.42
CNOT9-209ENST00000627282 HSP90B1P14625 803 aaKnown RBP23.91■■□□□ 1.42
CNOT9-209ENST00000627282 SF3B3Q15393 1217 aaKnown RBP23.91■■□□□ 1.42
CNOT9-209ENST00000627282 SLX4Q8IY92 1834 aa23.9■■□□□ 1.42
CNOT9-209ENST00000627282 C21orf2O43822 256 aa23.9■■□□□ 1.42
CNOT9-209ENST00000627282 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
CNOT9-209ENST00000627282 CTSWP56202 376 aa23.9■■□□□ 1.42
CNOT9-209ENST00000627282 FOXO4P98177 505 aa23.9■■□□□ 1.42
CNOT9-209ENST00000627282 C9orf131Q5VYM1 1079 aa23.9■■□□□ 1.42
CNOT9-209ENST00000627282 ZBTB7BO15156 539 aaPredicted RBP23.89■■□□□ 1.42
CNOT9-209ENST00000627282 MYH3P11055 1940 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 RASSF7Q02833 373 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 TTLL11Q8NHH1 800 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 NFKBIEO00221 500 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 GNAI3P08754 354 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 HOXA10P31260 410 aaPredicted RBP23.88■■□□□ 1.41
CNOT9-209ENST00000627282 CACNA1SQ13698 1873 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 CCDC85AQ96PX6 553 aaPredicted RBP23.88■■□□□ 1.41
CNOT9-209ENST00000627282 ZNF219Q9P2Y4 722 aaPredicted RBP23.88■■□□□ 1.41
CNOT9-209ENST00000627282 DDX19BQ9UMR2 479 aa23.88■■□□□ 1.41
CNOT9-209ENST00000627282 IGHDP01880 384 aa23.87■■□□□ 1.41
CNOT9-209ENST00000627282 CSF1RP07333 972 aa23.87■■□□□ 1.41
CNOT9-209ENST00000627282 BICC1Q9H694 974 aaKnown RBP23.87■■□□□ 1.41
CNOT9-209ENST00000627282 RNF181Q9P0P0 153 aa23.87■■□□□ 1.41
CNOT9-209ENST00000627282 SBF1O95248 1867 aa23.87■■□□□ 1.41
CNOT9-209ENST00000627282 ANKRD44Q8N8A2 993 aa23.86■■□□□ 1.41
CNOT9-209ENST00000627282 C7orf43Q8WVR3 580 aa23.86■■□□□ 1.41
CNOT9-209ENST00000627282 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
CNOT9-209ENST00000627282 LRRFIP2Q9Y608 721 aaKnown RBP23.86■■□□□ 1.41
CNOT9-209ENST00000627282 LMNB1P20700 586 aa23.85■■□□□ 1.41
CNOT9-209ENST00000627282 ALDH1B1P30837 517 aa23.85■■□□□ 1.41
CNOT9-209ENST00000627282 CCDC152Q4G0S7 254 aa23.85■■□□□ 1.41
CNOT9-209ENST00000627282 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
CNOT9-209ENST00000627282 RABL6Q3YEC7 729 aaPredicted RBP23.84■■□□□ 1.41
CNOT9-209ENST00000627282 LMBR1LQ6UX01 489 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 ZNF526Q8TF50 670 aaPredicted RBP23.84■■□□□ 1.41
CNOT9-209ENST00000627282 GREM2Q9H772 168 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 GPBP1L1Q9HC44 474 aaPredicted RBP23.84■■□□□ 1.41
CNOT9-209ENST00000627282 PCDHB15Q9Y5E8 787 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 COL4A1P02462 1669 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 FER1L6Q2WGJ9 1857 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 PRELPP51888 382 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 FAM161AQ3B820 660 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
CNOT9-209ENST00000627282 RBM17Q96I25 401 aaKnown RBP23.83■■□□□ 1.41
CNOT9-209ENST00000627282 CRAMP1Q96RY5 1269 aa23.83■■□□□ 1.41
CNOT9-209ENST00000627282 TAF1P21675 1872 aa23.83■■□□□ 1.4
CNOT9-209ENST00000627282 RTL9Q8NET4 1388 aa23.83■■□□□ 1.4
CNOT9-209ENST00000627282 GNAI2P04899 355 aa23.82■■□□□ 1.4
CNOT9-209ENST00000627282 DDX46Q7L014 1031 aaKnown RBP23.82■■□□□ 1.4
CNOT9-209ENST00000627282 C1orf115Q9H7X2 142 aa23.82■■□□□ 1.4
CNOT9-209ENST00000627282 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
CNOT9-209ENST00000627282 ZBTB40Q9NUA8 1239 aa23.81■■□□□ 1.4
CNOT9-209ENST00000627282 HDAC5Q9UQL6 1122 aa23.81■■□□□ 1.4
CNOT9-209ENST00000627282 CCDC93Q567U6 631 aa23.81■■□□□ 1.4
CNOT9-209ENST00000627282 CELF1Q92879 486 aaKnown RBP23.81■■□□□ 1.4
CNOT9-209ENST00000627282 TAOK3Q9H2K8 898 aa23.81■■□□□ 1.4
CNOT9-209ENST00000627282 ZC3H4Q9UPT8 1303 aaKnown RBP23.8■■□□□ 1.4
CNOT9-209ENST00000627282 ITGA6P23229 1130 aa23.8■■□□□ 1.4
CNOT9-209ENST00000627282 GRAPQ13588 217 aa23.8■■□□□ 1.4
CNOT9-209ENST00000627282 GRAPLQ8TC17 118 aaPredicted RBP23.8■■□□□ 1.4
CNOT9-209ENST00000627282 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
CNOT9-209ENST00000627282 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
CNOT9-209ENST00000627282 SLC51AQ86UW1 340 aa23.79■■□□□ 1.4
CNOT9-209ENST00000627282 OLFM4Q6UX06 510 aa23.78■■□□□ 1.4
CNOT9-209ENST00000627282 SKAP1Q86WV1 359 aa23.77■■□□□ 1.4
CNOT9-209ENST00000627282 CHMP4BQ9H444 224 aaKnown RBP23.77■■□□□ 1.4
CNOT9-209ENST00000627282 IFIT5Q13325 482 aaKnown RBP23.77■■□□□ 1.4
CNOT9-209ENST00000627282 MTX1Q13505 466 aa23.77■■□□□ 1.4
CNOT9-209ENST00000627282 RTKN2Q8IZC4 609 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms