RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 LTN1O94822 1766 aa10.36□□□□□ -0.75
CHD2-209ENST00000627185 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 MCCP23508 829 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 PSME1Q06323 249 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 KLHL40Q2TBA0 621 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
CHD2-209ENST00000627185 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 ZFRQ96KR1 1074 aaKnown RBP10.35□□□□□ -0.75
CHD2-209ENST00000627185 ESYT1Q9BSJ8 1104 aa10.35□□□□□ -0.75
CHD2-209ENST00000627185 TTC41PQ6P2S7 1318 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 CRYBG1Q9Y4K1 1723 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 F6X3S4 739 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
CHD2-209ENST00000627185 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
CHD2-209ENST00000627185 SLC10A3P09131 477 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
CHD2-209ENST00000627185 CHMLP26374 656 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 MIS18AQ9NYP9 233 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 C1orf167Q5SNV9 1468 aa10.34□□□□□ -0.75
CHD2-209ENST00000627185 PNMA6EA0A0J9YXQ4 647 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 GIGYF1O75420 1035 aaPredicted RBP10.33□□□□□ -0.76
CHD2-209ENST00000627185 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 ANKRD13DQ6ZTN6 518 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 OTUD7AQ8TE49 926 aaPredicted RBP10.33□□□□□ -0.76
CHD2-209ENST00000627185 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 HYPKQ9NX55 129 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 MRC1P22897 1456 aa10.33□□□□□ -0.76
CHD2-209ENST00000627185 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 GCGRP47871 477 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 TEFQ10587 303 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 KCNB2Q92953 911 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
CHD2-209ENST00000627185 LRRFIP2Q9Y608 721 aaKnown RBP10.32□□□□□ -0.76
CHD2-209ENST00000627185 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
CHD2-209ENST00000627185 ALS2Q96Q42 1657 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 ADCY9O60503 1353 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 CPDO75976 1380 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
CHD2-209ENST00000627185 HSP90AA1P07900 732 aaKnown RBP10.31□□□□□ -0.76
CHD2-209ENST00000627185 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHD2-209ENST00000627185 ZNF445P59923 1031 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 C1orf141Q5JVX7 400 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
CHD2-209ENST00000627185 NUTM1Q86Y26 1132 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 LINS1Q8NG48 757 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 PI4K2BQ8TCG2 481 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
CHD2-209ENST00000627185 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHD2-209ENST00000627185 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
CHD2-209ENST00000627185 GLRX3O76003 335 aaKnown RBP10.3□□□□□ -0.76
CHD2-209ENST00000627185 HSPA4P34932 840 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
CHD2-209ENST00000627185 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 EXOC6BQ9Y2D4 811 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
CHD2-209ENST00000627185 PI4KAP2A4QPH2 592 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 SPTLC1O15269 473 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 SGSM2O43147 1006 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 KDM4AO75164 1064 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
CHD2-209ENST00000627185 GJA5P36382 358 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 USP46P62068 366 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 PI4KAP1Q8N8J0 262 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
CHD2-209ENST00000627185 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD2-209ENST00000627185 TM6SF1Q9BZW5 370 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 LGR6Q9HBX8 967 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 RAD50Q92878 1312 aa10.29□□□□□ -0.76
CHD2-209ENST00000627185 RFX7Q2KHR2 1363 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 HIP1O00291 1037 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 BRD1O95696 1058 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 CNTROBQ8N137 903 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 PHAXQ9H814 394 aaKnown RBP10.28□□□□□ -0.76
CHD2-209ENST00000627185 GRPEL1Q9HAV7 217 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 CHPF2Q9P2E5 772 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
CHD2-209ENST00000627185 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
CHD2-209ENST00000627185 HS1BP3Q53T59 392 aa10.27□□□□□ -0.77
CHD2-209ENST00000627185 RSBN1LQ6PCB5 846 aaPredicted RBP10.27□□□□□ -0.77
CHD2-209ENST00000627185 RUFY2Q8WXA3 655 aa10.27□□□□□ -0.77
CHD2-209ENST00000627185 TMX3Q96JJ7 454 aa10.27□□□□□ -0.77
CHD2-209ENST00000627185 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
CHD2-209ENST00000627185 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms