RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 Q6ZS46 218 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 DHX32Q7L7V1 743 aaKnown RBP7.32□□□□□ -1.24
VBP1-204ENST00000625964 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 C2orf49Q9BVC5 232 aaPredicted RBP7.32□□□□□ -1.24
VBP1-204ENST00000625964 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
VBP1-204ENST00000625964 ZBTB42B2RXF5 422 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 RTN1Q16799 776 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 KRTAP5-3Q6L8H2 238 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
VBP1-204ENST00000625964 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
VBP1-204ENST00000625964 RBM19Q9Y4C8 960 aaKnown RBP7.31□□□□□ -1.24
VBP1-204ENST00000625964 ARID1BQ8NFD5 2236 aaPredicted RBP7.3□□□□□ -1.24
VBP1-204ENST00000625964 WWC1Q8IX03 1113 aa7.3□□□□□ -1.24
VBP1-204ENST00000625964 C21orf2O43822 256 aa7.29□□□□□ -1.24
VBP1-204ENST00000625964 MED26O95402 600 aa7.29□□□□□ -1.24
VBP1-204ENST00000625964 GRIK1P39086 918 aa7.29□□□□□ -1.24
VBP1-204ENST00000625964 TMEM132AQ24JP5 1023 aa7.29□□□□□ -1.24
VBP1-204ENST00000625964 ALX3O95076 343 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 NRLP54845 237 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 CLDN10P78369 228 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 PLAURQ03405 335 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 SIX5Q8N196 739 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 SMG9Q9H0W8 520 aaKnown RBP7.28□□□□□ -1.24
VBP1-204ENST00000625964 STOML1Q9UBI4 398 aa7.28□□□□□ -1.24
VBP1-204ENST00000625964 ZFATQ9P243 1243 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 TGFB1P01137 390 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 INPP5BP32019 993 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 CACTIN-AS1Q8N1I8 211 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 OGFOD1Q8N543 542 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
VBP1-204ENST00000625964 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
VBP1-204ENST00000625964 USP17L3A6NCW0 530 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 USP17L4A6NCW7 530 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 RARAP10276 462 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 SPINK2P20155 84 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 USP17L2Q6R6M4 530 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 USP17L1Q7RTZ2 530 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
VBP1-204ENST00000625964 DHX15O43143 795 aaKnown RBP7.25□□□□□ -1.25
VBP1-204ENST00000625964 GLB1P16278 677 aa7.25□□□□□ -1.25
VBP1-204ENST00000625964 TARSP26639 723 aaKnown RBP7.25□□□□□ -1.25
VBP1-204ENST00000625964 GRNP28799 593 aaKnown RBP7.25□□□□□ -1.25
VBP1-204ENST00000625964 ZDHHC13Q8IUH4 622 aa7.25□□□□□ -1.25
VBP1-204ENST00000625964 SCG3Q8WXD2 468 aaKnown RBP7.25□□□□□ -1.25
VBP1-204ENST00000625964 MUC3BQ9H195 1237 aa7.25□□□□□ -1.25
VBP1-204ENST00000625964 BCS1LQ9Y276 419 aa7.25□□□□□ -1.25
VBP1-204ENST00000625964 EIF2AK2P19525 551 aaKnown RBP7.24□□□□□ -1.25
VBP1-204ENST00000625964 IDH3AP50213 366 aa7.24□□□□□ -1.25
VBP1-204ENST00000625964 ARSDP51689 593 aa7.24□□□□□ -1.25
VBP1-204ENST00000625964 MLLT1Q03111 559 aaPredicted RBP7.24□□□□□ -1.25
VBP1-204ENST00000625964 DTX1Q86Y01 620 aa7.24□□□□□ -1.25
VBP1-204ENST00000625964 CEP41Q9BYV8 373 aa7.24□□□□□ -1.25
VBP1-204ENST00000625964 TLR7Q9NYK1 1049 aaKnown RBP7.24□□□□□ -1.25
VBP1-204ENST00000625964 WNT11O96014 354 aa7.23□□□□□ -1.25
VBP1-204ENST00000625964 UVSSAQ2YD98 709 aa7.23□□□□□ -1.25
VBP1-204ENST00000625964 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
VBP1-204ENST00000625964 CHMP7Q8WUX9 453 aaPredicted RBP7.23□□□□□ -1.25
VBP1-204ENST00000625964 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
VBP1-204ENST00000625964 DKK1O94907 266 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 NFIAQ12857 509 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 SETDB1Q15047 1291 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.22□□□□□ -1.25
VBP1-204ENST00000625964 IL22RA1Q8N6P7 574 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 PLD4Q96BZ4 506 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 RBSNQ9H1K0 784 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 COG6Q9Y2V7 657 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 SASH3O75995 380 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 MCM6Q14566 821 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 UBL7Q96S82 380 aaPredicted RBP7.22□□□□□ -1.25
VBP1-204ENST00000625964 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
VBP1-204ENST00000625964 LOC102724428A0A0B4J2F2 783 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 ATP9BO43861 1147 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 GHRHP01286 108 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 SEC13P55735 322 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 SIK1P57059 783 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 HFE2Q6ZVN8 426 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 DBNDD2Q9BQY9 259 aa7.21□□□□□ -1.26
VBP1-204ENST00000625964 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
VBP1-204ENST00000625964 EGFRP00533 1210 aa7.2□□□□□ -1.26
VBP1-204ENST00000625964 RNF43Q68DV7 783 aa7.2□□□□□ -1.26
VBP1-204ENST00000625964 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
VBP1-204ENST00000625964 AGGF1Q8N302 714 aaeCLIP7.2□□□□□ -1.26
VBP1-204ENST00000625964 ADGRE2Q9UHX3 823 aa7.2□□□□□ -1.26
VBP1-204ENST00000625964 PSAPP07602 524 aa7.19□□□□□ -1.26
VBP1-204ENST00000625964 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
VBP1-204ENST00000625964 IGFBP4P22692 258 aa7.19□□□□□ -1.26
VBP1-204ENST00000625964 ARMC10Q8N2F6 343 aa7.19□□□□□ -1.26
VBP1-204ENST00000625964 ZNF594Q96JF6 807 aaPredicted RBP7.19□□□□□ -1.26
VBP1-204ENST00000625964 PRR19A6NJB7 356 aa7.18□□□□□ -1.26
VBP1-204ENST00000625964 SOX18P35713 384 aa7.18□□□□□ -1.26
VBP1-204ENST00000625964 JAG1P78504 1218 aa7.18□□□□□ -1.26
VBP1-204ENST00000625964 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
VBP1-204ENST00000625964 MICAL2O94851 1124 aa7.17□□□□□ -1.26
VBP1-204ENST00000625964 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
VBP1-204ENST00000625964 PPME1Q9Y570 386 aa7.17□□□□□ -1.26
VBP1-204ENST00000625964 UTP4Q969X6 686 aaKnown RBP7.17□□□□□ -1.26
VBP1-204ENST00000625964 KLK14Q9P0G3 267 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms