RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NRDCO43847 1150 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 OAS2P29728 719 aaKnown RBP17.75■□□□□ 0.43
PMS1-221ENST00000624204 GSDMDP57764 484 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 ZSCAN26Q16670 478 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 BRF1Q92994 677 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 L2HGDHQ9H9P8 463 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
PMS1-221ENST00000624204 KIF20BQ96Q89 1820 aa17.74■□□□□ 0.43
PMS1-221ENST00000624204 PSMA5P28066 241 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 GOLGA8FQ08AF8 430 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 GOLGA8DPQ0D2H9 430 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 LMTK2Q8IWU2 1503 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 NECTIN1Q15223 517 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 DHX40Q8IX18 779 aaKnown RBP17.73■□□□□ 0.43
PMS1-221ENST00000624204 CARD6Q9BX69 1037 aa17.73■□□□□ 0.43
PMS1-221ENST00000624204 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
PMS1-221ENST00000624204 LCMT1Q9UIC8 334 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 MYO1CO00159 1063 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 LMAN1P49257 510 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
PMS1-221ENST00000624204 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
PMS1-221ENST00000624204 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
PMS1-221ENST00000624204 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
PMS1-221ENST00000624204 ATP7BP35670 1465 aa17.71■□□□□ 0.43
PMS1-221ENST00000624204 SLC27A2O14975 620 aa17.71■□□□□ 0.43
PMS1-221ENST00000624204 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
PMS1-221ENST00000624204 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
PMS1-221ENST00000624204 ZRANB2O95218 330 aaKnown RBP eCLIP17.7■□□□□ 0.425e-9■□□□□ 10.7
PMS1-221ENST00000624204 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
PMS1-221ENST00000624204 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
PMS1-221ENST00000624204 NDUFB9Q9Y6M9 179 aa17.7■□□□□ 0.42
PMS1-221ENST00000624204 ME1P48163 572 aa17.7■□□□□ 0.42
PMS1-221ENST00000624204 SMC1AQ14683 1233 aaKnown RBP17.7■□□□□ 0.42
PMS1-221ENST00000624204 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
PMS1-221ENST00000624204 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
PMS1-221ENST00000624204 PA2G4Q9UQ80 394 aaKnown RBP17.7■□□□□ 0.42
PMS1-221ENST00000624204 ARMCX5Q6P1M9 558 aa17.7■□□□□ 0.42
PMS1-221ENST00000624204 GOLPH3LQ9H4A5 285 aa17.7■□□□□ 0.42
PMS1-221ENST00000624204 ABCA9Q8IUA7 1624 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 CTAGE5O15320 804 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 EVCP57679 992 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 ETF1P62495 437 aaKnown RBP17.69■□□□□ 0.42
PMS1-221ENST00000624204 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 NFATC2IPQ8NCF5 419 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 CWC15Q9P013 229 aaKnown RBP17.69■□□□□ 0.42
PMS1-221ENST00000624204 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
PMS1-221ENST00000624204 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 CRB1P82279 1406 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
PMS1-221ENST00000624204 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 FSIP1Q8NA03 581 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 ECHDC1Q9NTX5 307 aa17.69■□□□□ 0.42
PMS1-221ENST00000624204 SASH3O75995 380 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 MLECQ14165 292 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 RESTQ13127 1097 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 GPATCH3Q96I76 525 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 AK7Q96M32 723 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
PMS1-221ENST00000624204 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
PMS1-221ENST00000624204 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
PMS1-221ENST00000624204 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
PMS1-221ENST00000624204 MUM1L1Q5H9M0 696 aa17.67■□□□□ 0.42
PMS1-221ENST00000624204 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
PMS1-221ENST00000624204 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
PMS1-221ENST00000624204 OSBPL5Q9H0X9 879 aaPredicted RBP17.67■□□□□ 0.42
PMS1-221ENST00000624204 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
PMS1-221ENST00000624204 HDGFL1Q5TGJ6 251 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 AACSQ86V21 672 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 EDC3Q96F86 508 aaKnown RBP17.66■□□□□ 0.42
PMS1-221ENST00000624204 BOLA2Q9H3K6 86 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 GTF2A1P52655 376 aaPredicted RBP17.66■□□□□ 0.42
PMS1-221ENST00000624204 POLA2Q14181 598 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 MAP4K1Q92918 833 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 FSD1Q9BTV5 496 aa17.66■□□□□ 0.42
PMS1-221ENST00000624204 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 WASLO00401 505 aaPredicted RBP17.65■□□□□ 0.42
PMS1-221ENST00000624204 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
PMS1-221ENST00000624204 TBC1D8O95759 1140 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 CASQ1P31415 396 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
PMS1-221ENST00000624204 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 IMPACTQ9P2X3 320 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 LMOD1P29536 600 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms