RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 GRIPAP1Q4V328 841 aa23.59■■□□□ 1.37
PCDHB5-202ENST00000623915 SLC10A5Q5PT55 438 aa23.59■■□□□ 1.37
PCDHB5-202ENST00000623915 MAP1SQ66K74 1059 aaPredicted RBP23.59■■□□□ 1.37
PCDHB5-202ENST00000623915 ANKRD13DQ6ZTN6 518 aa23.59■■□□□ 1.37
PCDHB5-202ENST00000623915 CT47B1P0C2W7 299 aaPredicted RBP23.58■■□□□ 1.37
PCDHB5-202ENST00000623915 SCNN1DP51172 638 aa23.58■■□□□ 1.37
PCDHB5-202ENST00000623915 TRIM28Q13263 835 aaKnown RBP23.58■■□□□ 1.37
PCDHB5-202ENST00000623915 CLEC11AQ9Y240 323 aa23.58■■□□□ 1.37
PCDHB5-202ENST00000623915 TCERG1O14776 1098 aaKnown RBP23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 EIF6P56537 245 aaKnown RBP23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 CNTROBQ8N137 903 aa23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 LARGE2Q8N3Y3 721 aa23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 UTP14AQ9BVJ6 771 aaKnown RBP23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 STK31Q9BXU1 1019 aa23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 ABCC4O15439 1325 aa23.57■■□□□ 1.36
PCDHB5-202ENST00000623915 CAPN15O75808 1086 aa23.56■■□□□ 1.36
PCDHB5-202ENST00000623915 VEGFBP49765 207 aa23.56■■□□□ 1.36
PCDHB5-202ENST00000623915 NLRP3Q96P20 1036 aa23.56■■□□□ 1.36
PCDHB5-202ENST00000623915 GJA3Q9Y6H8 435 aa23.56■■□□□ 1.36
PCDHB5-202ENST00000623915 ATP6V0A2Q9Y487 856 aa23.55■■□□□ 1.36
PCDHB5-202ENST00000623915 FOXN1O15353 648 aa23.54■■□□□ 1.36
PCDHB5-202ENST00000623915 EPS15P42566 896 aa23.54■■□□□ 1.36
PCDHB5-202ENST00000623915 NLRP10Q86W26 655 aa23.54■■□□□ 1.36
PCDHB5-202ENST00000623915 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
PCDHB5-202ENST00000623915 PHAXQ9H814 394 aaKnown RBP23.54■■□□□ 1.36
PCDHB5-202ENST00000623915 RASSF10A6NK89 507 aa23.53■■□□□ 1.36
PCDHB5-202ENST00000623915 DDX58O95786 925 aaKnown RBP23.53■■□□□ 1.36
PCDHB5-202ENST00000623915 AIMP1Q12904 312 aaKnown RBP23.53■■□□□ 1.36
PCDHB5-202ENST00000623915 PPIP5K2O43314 1243 aa23.52■■□□□ 1.36
PCDHB5-202ENST00000623915 AOC3Q16853 763 aa23.52■■□□□ 1.36
PCDHB5-202ENST00000623915 NIM1KQ8IY84 436 aa23.52■■□□□ 1.36
PCDHB5-202ENST00000623915 RTFDC1Q9BY42 306 aaPredicted RBP23.52■■□□□ 1.36
PCDHB5-202ENST00000623915 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
PCDHB5-202ENST00000623915 SLC4A2P04920 1241 aa23.51■■□□□ 1.35
PCDHB5-202ENST00000623915 HCLS1P14317 486 aaPredicted RBP23.51■■□□□ 1.35
PCDHB5-202ENST00000623915 LMOD1P29536 600 aaPredicted RBP23.51■■□□□ 1.35
PCDHB5-202ENST00000623915 CDCA7LQ96GN5 454 aa23.51■■□□□ 1.35
PCDHB5-202ENST00000623915 DUOX1Q9NRD9 1551 aa23.51■■□□□ 1.35
PCDHB5-202ENST00000623915 LRRC37AA6NMS7 1700 aa23.5■■□□□ 1.35
PCDHB5-202ENST00000623915 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
PCDHB5-202ENST00000623915 TAF1P21675 1872 aa23.5■■□□□ 1.35
PCDHB5-202ENST00000623915 KSR2Q6VAB6 950 aa23.5■■□□□ 1.35
PCDHB5-202ENST00000623915 THSD7BQ9C0I4 1608 aa23.5■■□□□ 1.35
PCDHB5-202ENST00000623915 FMR1Q06787 632 aaKnown RBP eCLIP23.49■■□□□ 1.35
PCDHB5-202ENST00000623915 METTL22Q9BUU2 404 aaPredicted RBP23.49■■□□□ 1.35
PCDHB5-202ENST00000623915 VPS33BQ9H267 617 aa23.49■■□□□ 1.35
PCDHB5-202ENST00000623915 BRPF1P55201 1214 aaPredicted RBP23.48■■□□□ 1.35
PCDHB5-202ENST00000623915 FLIIQ13045 1269 aa23.48■■□□□ 1.35
PCDHB5-202ENST00000623915 WBP1LQ9NX94 342 aa23.48■■□□□ 1.35
PCDHB5-202ENST00000623915 BBOX1O75936 387 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 HNRNPUQ00839 825 aaKnown RBP eCLIP23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 CXCL9Q07325 125 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 USP50Q70EL3 339 aaPredicted RBP23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 RIC3Q7Z5B4 369 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 SP8Q8IXZ3 490 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 GPRC5DQ9NZD1 345 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 ZNRF3Q9ULT6 936 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 SH3TC1Q8TE82 1336 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 COL4A1P02462 1669 aa23.47■■□□□ 1.35
PCDHB5-202ENST00000623915 DEFB115Q30KQ5 88 aa23.46■■□□□ 1.35
PCDHB5-202ENST00000623915 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
PCDHB5-202ENST00000623915 TRPM7Q96QT4 1865 aa23.46■■□□□ 1.35
PCDHB5-202ENST00000623915 PRDM10Q9NQV6 1147 aa23.46■■□□□ 1.35
PCDHB5-202ENST00000623915 KIAA2012Q0VF49 1180 aa23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 GRAPQ13588 217 aa23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 G2E3Q7L622 706 aa23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 GRAPLQ8TC17 118 aaPredicted RBP23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 TMX4Q9H1E5 349 aaPredicted RBP23.45■■□□□ 1.34
PCDHB5-202ENST00000623915 WDR33Q9C0J8 1336 aaKnown RBP23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 TRAF5O00463 557 aa23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 CTCFP49711 727 aaPredicted RBP23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 MPNDQ8N594 471 aa23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 ABT1Q9ULW3 272 aaKnown RBP23.44■■□□□ 1.34
PCDHB5-202ENST00000623915 CST9Q5W186 159 aa23.43■■□□□ 1.34
PCDHB5-202ENST00000623915 DDX46Q7L014 1031 aaKnown RBP23.43■■□□□ 1.34
PCDHB5-202ENST00000623915 AIDAQ96BJ3 306 aa23.43■■□□□ 1.34
PCDHB5-202ENST00000623915 ADARB2Q9NS39 739 aaKnown RBP23.43■■□□□ 1.34
PCDHB5-202ENST00000623915 MAP3K2Q9Y2U5 619 aa23.43■■□□□ 1.34
PCDHB5-202ENST00000623915 GMPSP49915 693 aaPredicted RBP23.42■■□□□ 1.34
PCDHB5-202ENST00000623915 PTPRCP08575 1304 aa23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 CDHR2Q9BYE9 1310 aa23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 YDJCA8MPS7 323 aa23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 CIAPIN1Q6FI81 312 aa23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 MRPL50Q8N5N7 158 aaKnown RBP23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 ZBTB38Q8NAP3 1195 aaPredicted RBP23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
PCDHB5-202ENST00000623915 MYH3P11055 1940 aa23.39■■□□□ 1.34
PCDHB5-202ENST00000623915 RAD17O75943 681 aa23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 PCCAP05165 728 aaPredicted RBP23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 IGKV5-2P06315 115 aa23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 HSPA8P11142 646 aaKnown RBP23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 LBX1P52954 281 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms