RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PLA2G4DQ86XP0 818 aa15.37■□□□□ 0.05
CHD1L-210ENST00000622533 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 BTBD11A6QL63 1104 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 PTH1RQ03431 593 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
CHD1L-210ENST00000622533 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
CHD1L-210ENST00000622533 TNMDQ9H2S6 317 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 DACT1Q9NYF0 836 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 ZNF446Q9NWS9 450 aa15.36■□□□□ 0.05
CHD1L-210ENST00000622533 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
CHD1L-210ENST00000622533 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 NECAB1Q8N987 351 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 DNAJC25Q9H1X3 360 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 LTN1O94822 1766 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 MAP4K1Q92918 833 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
CHD1L-210ENST00000622533 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 CALCOCO1Q9P1Z2 691 aa15.35■□□□□ 0.05
CHD1L-210ENST00000622533 ADCK5Q3MIX3 580 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 LARP1BQ659C4 914 aaKnown RBP15.34■□□□□ 0.05
CHD1L-210ENST00000622533 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
CHD1L-210ENST00000622533 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
CHD1L-210ENST00000622533 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
CHD1L-210ENST00000622533 PTPN14Q15678 1187 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 ME3Q16798 604 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
CHD1L-210ENST00000622533 LGR6Q9HBX8 967 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 FAM53CQ9NYF3 392 aa15.34■□□□□ 0.05
CHD1L-210ENST00000622533 AACSQ86V21 672 aa15.33■□□□□ 0.05
CHD1L-210ENST00000622533 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.05
CHD1L-210ENST00000622533 SYTL4Q96C24 671 aaPredicted RBP15.33■□□□□ 0.05
CHD1L-210ENST00000622533 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.05
CHD1L-210ENST00000622533 ZNF165P49910 485 aa15.33■□□□□ 0.04
CHD1L-210ENST00000622533 HNRNPH2P55795 449 aaKnown RBP15.33■□□□□ 0.04
CHD1L-210ENST00000622533 G3BP1Q13283 466 aaKnown RBP eCLIP15.33■□□□□ 0.042e-7■□□□□ 8.3
CHD1L-210ENST00000622533 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
CHD1L-210ENST00000622533 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
CHD1L-210ENST00000622533 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
CHD1L-210ENST00000622533 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
CHD1L-210ENST00000622533 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
CHD1L-210ENST00000622533 UTYO14607 1347 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 ERBB3P21860 1342 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 TULP2O00295 520 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 ZNF530Q6P9A1 599 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-210ENST00000622533 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 CDC37L1Q7L3B6 337 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 LRRC8AQ8IWT6 810 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 NFAT5O94916 1531 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
CHD1L-210ENST00000622533 ST3GAL1Q11201 340 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 LINS1Q8NG48 757 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
CHD1L-210ENST00000622533 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
CHD1L-210ENST00000622533 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 SLC27A2O14975 620 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 SKILP12757 684 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 LRRN4CLQ8ND94 238 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
CHD1L-210ENST00000622533 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-210ENST00000622533 TSGA10IPQ3SY00 556 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 FILIP1Q7Z7B0 1213 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
CHD1L-210ENST00000622533 ERO1AQ96HE7 468 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 USP16Q9Y5T5 823 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 GRM8O00222 908 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
CHD1L-210ENST00000622533 KRT32Q14532 448 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 ERCC6LQ2NKX8 1250 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-210ENST00000622533 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-210ENST00000622533 NR1I2O75469 434 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 CAVIN2O95810 425 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
CHD1L-210ENST00000622533 A0A087WWV3 80 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 KCNQ3O43525 872 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 RPS6KB1P23443 525 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 CYP2C19P33261 490 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
CHD1L-210ENST00000622533 KCNA6P17658 529 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 PA2G4Q9UQ80 394 aaKnown RBP15.29■□□□□ 0.04
CHD1L-210ENST00000622533 JCADQ9P266 1359 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 LMTK3Q96Q04 1460 aa15.29■□□□□ 0.04
CHD1L-210ENST00000622533 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
CHD1L-210ENST00000622533 ANXA1P04083 346 aa15.28■□□□□ 0.04
CHD1L-210ENST00000622533 COL9A3Q14050 684 aaPredicted RBP15.28■□□□□ 0.04
CHD1L-210ENST00000622533 FSD1Q9BTV5 496 aa15.28■□□□□ 0.04
CHD1L-210ENST00000622533 ZBTB9Q96C00 473 aa15.28■□□□□ 0.04
CHD1L-210ENST00000622533 SPATA32Q96LK8 384 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms