RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 HAUS7Q99871 368 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
EPB42-210ENST00000622454 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
EPB42-210ENST00000622454 KCNJ4P48050 445 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 CERKQ8TCT0 537 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 ARXQ96QS3 562 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
EPB42-210ENST00000622454 MED23Q9ULK4 1368 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
EPB42-210ENST00000622454 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
EPB42-210ENST00000622454 NUP98P52948 1817 aa16.81■□□□□ 0.28
EPB42-210ENST00000622454 AK2P54819 239 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 NEUROD6Q96NK8 337 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 PLA2G12BQ9BX93 195 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 FAM98CQ17RN3 349 aaKnown RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 JAKMIP1Q96N16 626 aaKnown RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
EPB42-210ENST00000622454 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
EPB42-210ENST00000622454 MYH3P11055 1940 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 CYP46A1Q9Y6A2 500 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 BCL9LQ86UU0 1499 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 ZNF609O15014 1411 aa16.79■□□□□ 0.28
EPB42-210ENST00000622454 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 VPS53Q5VIR6 699 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 TIMM10P62072 90 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 HLFQ16534 295 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 RUFY3Q7L099 469 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
EPB42-210ENST00000622454 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 BRD1O95696 1058 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 CSF1RP07333 972 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 ZNF589Q86UQ0 364 aaPredicted RBP16.77■□□□□ 0.28
EPB42-210ENST00000622454 TICAM2Q86XR7 235 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 CEP126Q9P2H0 1117 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.28
EPB42-210ENST00000622454 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 SLC27A2O14975 620 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.27
EPB42-210ENST00000622454 VPS72Q15906 364 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 NLRP10Q86W26 655 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.27
EPB42-210ENST00000622454 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
EPB42-210ENST00000622454 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 TAF5LO75529 589 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 CPA1P15085 419 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 PSMA5P28066 241 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 KLHL40Q2TBA0 621 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 DDX46Q7L014 1031 aaKnown RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 HMG20BQ9P0W2 317 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 RPAP1Q9BWH6 1393 aaPredicted RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 GPTP24298 496 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 FNBP4Q8N3X1 1017 aaPredicted RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
EPB42-210ENST00000622454 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 DDX49Q9Y6V7 483 aaKnown RBP16.76■□□□□ 0.27
EPB42-210ENST00000622454 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
EPB42-210ENST00000622454 USP21Q9UK80 565 aa16.75■□□□□ 0.27
EPB42-210ENST00000622454 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
EPB42-210ENST00000622454 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.75■□□□□ 0.27
EPB42-210ENST00000622454 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
EPB42-210ENST00000622454 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
EPB42-210ENST00000622454 TAF7LQ5H9L4 462 aa16.74■□□□□ 0.27
EPB42-210ENST00000622454 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
EPB42-210ENST00000622454 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
EPB42-210ENST00000622454 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
EPB42-210ENST00000622454 LMBRD1Q9NUN5 540 aa16.74■□□□□ 0.27
EPB42-210ENST00000622454 SH2B1Q9NRF2 756 aaPredicted RBP16.74■□□□□ 0.27
EPB42-210ENST00000622454 GOLIM4O00461 696 aa16.73■□□□□ 0.27
EPB42-210ENST00000622454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
EPB42-210ENST00000622454 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
EPB42-210ENST00000622454 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
EPB42-210ENST00000622454 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
EPB42-210ENST00000622454 HSPA1LP34931 641 aa16.73■□□□□ 0.27
EPB42-210ENST00000622454 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
EPB42-210ENST00000622454 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
EPB42-210ENST00000622454 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
EPB42-210ENST00000622454 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
EPB42-210ENST00000622454 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms