RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 TTLL11Q8NHH1 800 aa17.03■□□□□ 0.32
MECP2-213ENST00000622433 C7orf43Q8WVR3 580 aa17.03■□□□□ 0.32
MECP2-213ENST00000622433 USP44Q9H0E7 712 aa17.03■□□□□ 0.32
MECP2-213ENST00000622433 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
MECP2-213ENST00000622433 MYH3P11055 1940 aa17.02■□□□□ 0.32
MECP2-213ENST00000622433 BBOX1O75936 387 aa17.02■□□□□ 0.32
MECP2-213ENST00000622433 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
MECP2-213ENST00000622433 GRAPQ13588 217 aa17.02■□□□□ 0.32
MECP2-213ENST00000622433 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
MECP2-213ENST00000622433 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
MECP2-213ENST00000622433 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 CSF1RP07333 972 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 MS4A1P11836 297 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 FOXO4P98177 505 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
MECP2-213ENST00000622433 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
MECP2-213ENST00000622433 C21orf2O43822 256 aa17■□□□□ 0.31
MECP2-213ENST00000622433 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
MECP2-213ENST00000622433 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
MECP2-213ENST00000622433 SUCLG2Q96I99 432 aa17■□□□□ 0.31
MECP2-213ENST00000622433 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
MECP2-213ENST00000622433 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
MECP2-213ENST00000622433 KAZALD1Q96I82 304 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
MECP2-213ENST00000622433 RABL6Q3YEC7 729 aaPredicted RBP16.98■□□□□ 0.31
MECP2-213ENST00000622433 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 CDC5LQ99459 802 aaKnown RBP16.98■□□□□ 0.31
MECP2-213ENST00000622433 GREM2Q9H772 168 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
MECP2-213ENST00000622433 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
MECP2-213ENST00000622433 COL4A1P02462 1669 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 GNAI3P08754 354 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
MECP2-213ENST00000622433 RLBP1P12271 317 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
MECP2-213ENST00000622433 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
MECP2-213ENST00000622433 MEIS3Q99687 375 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
MECP2-213ENST00000622433 NFKBIEO00221 500 aa16.96■□□□□ 0.31
MECP2-213ENST00000622433 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
MECP2-213ENST00000622433 TAF1P21675 1872 aa16.95■□□□□ 0.3
MECP2-213ENST00000622433 ITGA6P23229 1130 aa16.95■□□□□ 0.3
MECP2-213ENST00000622433 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
MECP2-213ENST00000622433 ANKRD18AQ8IVF6 992 aa16.95■□□□□ 0.3
MECP2-213ENST00000622433 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
MECP2-213ENST00000622433 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
MECP2-213ENST00000622433 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
MECP2-213ENST00000622433 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 PLIN1O60240 522 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
MECP2-213ENST00000622433 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
MECP2-213ENST00000622433 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 PSMD1Q99460 953 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 TAOK3Q9H2K8 898 aa16.94■□□□□ 0.3
MECP2-213ENST00000622433 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
MECP2-213ENST00000622433 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
MECP2-213ENST00000622433 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
MECP2-213ENST00000622433 CHD4Q14839 1912 aa16.92■□□□□ 0.3
MECP2-213ENST00000622433 IGHMBP2P38935 993 aaKnown RBP16.92■□□□□ 0.3
MECP2-213ENST00000622433 RASSF7Q02833 373 aa16.92■□□□□ 0.3
MECP2-213ENST00000622433 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
MECP2-213ENST00000622433 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
MECP2-213ENST00000622433 GNAI2P04899 355 aa16.91■□□□□ 0.3
MECP2-213ENST00000622433 LMNB1P20700 586 aa16.91■□□□□ 0.3
MECP2-213ENST00000622433 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
MECP2-213ENST00000622433 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
MECP2-213ENST00000622433 SLC51AQ86UW1 340 aa16.91■□□□□ 0.3
MECP2-213ENST00000622433 MPNDQ8N594 471 aa16.91■□□□□ 0.3
MECP2-213ENST00000622433 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
MECP2-213ENST00000622433 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
MECP2-213ENST00000622433 MTX1Q13505 466 aa16.9■□□□□ 0.3
MECP2-213ENST00000622433 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
MECP2-213ENST00000622433 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
MECP2-213ENST00000622433 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
MECP2-213ENST00000622433 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
MECP2-213ENST00000622433 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.3
MECP2-213ENST00000622433 SBF1O95248 1867 aa16.89■□□□□ 0.29
MECP2-213ENST00000622433 PRELPP51888 382 aa16.89■□□□□ 0.29
MECP2-213ENST00000622433 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.29
MECP2-213ENST00000622433 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
MECP2-213ENST00000622433 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
MECP2-213ENST00000622433 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
MECP2-213ENST00000622433 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
MECP2-213ENST00000622433 GPSM2P81274 684 aa16.88■□□□□ 0.29
MECP2-213ENST00000622433 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
MECP2-213ENST00000622433 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms