RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	MKRN1	Q9UHC7	482 aa	Known RBP	5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	SCAF8	Q9UPN6	1271 aa	Known RBP	5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	CLEC11A	Q9Y240	323 aa		5.75	□□□□□ -1.49
LINC00649-219	ENST00000622171	SLC4A2	P04920	1241 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	VEGFA	P15692	232 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	ALDH1B1	P30837	517 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	EPS15	P42566	896 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	GPSM2	P81274	684 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	FKBP5	Q13451	457 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	GRAP	Q13588	217 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	HSP90AB3P	Q58FF7	597 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	CCDC30	Q5VVM6	783 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	MAP1S	Q66K74	1059 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	DPP8	Q6V1X1	898 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	DDX46	Q7L014	1031 aa	Known RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	NIM1K	Q8IY84	436 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	GRAPL	Q8TC17	118 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	FBXW7	Q969H0	707 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	CDCA7L	Q96GN5	454 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	STK31	Q9BXU1	1019 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	BABAM1	Q9NWV8	329 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	ZBTB12	Q9Y330	459 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	CHMP3	Q9Y3E7	222 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	LTBP3	Q9NS15	1303 aa		5.74	□□□□□ -1.49
LINC00649-219	ENST00000622171	YDJC	A8MPS7	323 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	C6orf229	H3BNL8	230 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	SNAP23	O00161	211 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	TRAF5	O00463	557 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	HOXB7	P09629	217 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	KLRK1	P26718	216 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	HOXA10	P31260	410 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	GMPS	P49915	693 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	CALD1	Q05682	793 aa	Known RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	FLII	Q13045	1269 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	FAM161A	Q3B820	660 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	SOGA3	Q5TF21	947 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	DPY19L2	Q6NUT2	758 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	SLC4A10	Q6U841	1118 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	RTKN2	Q8IZC4	609 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	MPND	Q8N594	471 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	SMC1B	Q8NDV3	1235 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	RBM46	Q8TBY0	533 aa	Known RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	TRPM4	Q8TD43	1214 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	JDP2	Q8WYK2	163 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	CRAMP1	Q96RY5	1269 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	METTL22	Q9BUU2	404 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	MXD3	Q9BW11	206 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	GREM2	Q9H772	168 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	CWC25	Q9NXE8	425 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	JAG2	Q9Y219	1238 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	ATP6V0A2	Q9Y487	856 aa		5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	ASTN2	O75129	1339 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00649-219	ENST00000622171	NEURL1B	A8MQ27	555 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	UFL1	O94874	794 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	EGFR	P00533	1210 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	EPHX2	P34913	555 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	SCNN1D	P51172	638 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	EIF6	P56537	245 aa	Known RBP	5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	RBM26	Q5T8P6	1007 aa	Known RBP	5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	KSR2	Q6VAB6	950 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	HELB	Q8NG08	1087 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	ZNF594	Q96JF6	807 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	ZNF408	Q9H9D4	720 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	ANKIB1	Q9P2G1	1089 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	POLL	Q9UGP5	575 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	HACL1	Q9UJ83	578 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	PDZRN3	Q9UPQ7	1066 aa		5.72	□□□□□ -1.49
LINC00649-219	ENST00000622171	CASP8AP2	Q9UKL3	1982 aa		5.71	□□□□□ -1.49
LINC00649-219	ENST00000622171	RTL9	Q8NET4	1388 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	FZD9	O00144	591 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	PSMD14	O00487	310 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	ECE2	O60344	883 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	VAMP4	O75379	141 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	CAPN15	O75808	1086 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	DDX58	O95786	925 aa	Known RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	PCCA	P05165	728 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	APLP1	P51693	650 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	CTSW	P56202	376 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	CXCL9	Q07325	125 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	EPHA10	Q5JZY3	1008 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	SLC10A5	Q5PT55	438 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	CHADL	Q6NUI6	762 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	MIER1	Q8N108	512 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	DNAAF4	Q8WXU2	420 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	PSMD1	Q99460	953 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	TMX4	Q9H1E5	349 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	TNN	Q9UQP3	1299 aa		5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	ZC3H4	Q9UPT8	1303 aa	Known RBP	5.71	□□□□□ -1.5
LINC00649-219	ENST00000622171	ECM29	Q5VYK3	1845 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	PLIN1	O60240	522 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	PDE8A	O60658	829 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	TAF5L	O75529	589 aa		5.7	□□□□□ -1.5
LINC00649-219	ENST00000622171	LMOD1	P29536	600 aa	Predicted RBP	5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms