RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
FAM3A-222ENST00000621967 DDX49Q9Y6V7 483 aaKnown RBP21.15■□□□□ 0.98
FAM3A-222ENST00000621967 C4AP0C0L4 1744 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 ZPR1O75312 459 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 BEND3Q5T5X7 828 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 RILPL2Q969X0 211 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 LMBRD1Q9NUN5 540 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 ZDHHC9Q9Y397 364 aa21.14■□□□□ 0.98
FAM3A-222ENST00000621967 NEK4P51957 841 aa21.14■□□□□ 0.97
FAM3A-222ENST00000621967 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
FAM3A-222ENST00000621967 MCTP1Q6DN14 999 aa21.14■□□□□ 0.97
FAM3A-222ENST00000621967 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.97
FAM3A-222ENST00000621967 ERVV-1B6SEH8 477 aa21.13■□□□□ 0.97
FAM3A-222ENST00000621967 CUL4AQ13619 759 aa21.13■□□□□ 0.97
FAM3A-222ENST00000621967 TMX3Q96JJ7 454 aa21.13■□□□□ 0.97
FAM3A-222ENST00000621967 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
FAM3A-222ENST00000621967 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
FAM3A-222ENST00000621967 SCN7AQ01118 1682 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 CAMTA2O94983 1202 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 ZNF652Q9Y2D9 606 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 BCORQ6W2J9 1755 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 PI4K2BQ8TCG2 481 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 RHPN1Q8TCX5 695 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 MYD88Q99836 296 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 METTL22Q9BUU2 404 aaPredicted RBP21.12■□□□□ 0.97
FAM3A-222ENST00000621967 IL1RAPL2Q9NP60 686 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 ANO2Q9NQ90 1003 aa21.12■□□□□ 0.97
FAM3A-222ENST00000621967 USP42Q9H9J4 1324 aaKnown RBP21.11■□□□□ 0.97
FAM3A-222ENST00000621967 SURF6O75683 361 aaKnown RBP21.11■□□□□ 0.97
FAM3A-222ENST00000621967 NBPF7P0C2Y1 421 aaPredicted RBP21.11■□□□□ 0.97
FAM3A-222ENST00000621967 HSP90AB3PQ58FF7 597 aa21.11■□□□□ 0.97
FAM3A-222ENST00000621967 GIGYF2Q6Y7W6 1299 aaKnown RBP21.11■□□□□ 0.97
FAM3A-222ENST00000621967 SRP68Q9UHB9 627 aaKnown RBP21.11■□□□□ 0.97
FAM3A-222ENST00000621967 PNPLA7Q6ZV29 1317 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 ZNF445P59923 1031 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 HLFQ16534 295 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 KIF1BPQ96EK5 621 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 SRGAP3O43295 1099 aa21.1■□□□□ 0.97
FAM3A-222ENST00000621967 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
FAM3A-222ENST00000621967 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
FAM3A-222ENST00000621967 INTS4Q96HW7 963 aaKnown RBP21.09■□□□□ 0.97
FAM3A-222ENST00000621967 NUP98P52948 1817 aa21.09■□□□□ 0.97
FAM3A-222ENST00000621967 MTX1Q13505 466 aa21.08■□□□□ 0.97
FAM3A-222ENST00000621967 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
FAM3A-222ENST00000621967 LINS1Q8NG48 757 aa21.08■□□□□ 0.97
FAM3A-222ENST00000621967 IL25Q9H293 177 aa21.08■□□□□ 0.97
FAM3A-222ENST00000621967 ATP5J2-PTCD1G3V325 749 aa21.08■□□□□ 0.96
FAM3A-222ENST00000621967 TCIRG1Q13488 830 aa21.08■□□□□ 0.96
FAM3A-222ENST00000621967 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.96
FAM3A-222ENST00000621967 CLEC4GQ6UXB4 293 aa21.08■□□□□ 0.96
FAM3A-222ENST00000621967 ANKRD36CQ5JPF3 1778 aa21.07■□□□□ 0.96
FAM3A-222ENST00000621967 RGL2O15211 777 aa21.07■□□□□ 0.96
FAM3A-222ENST00000621967 HSPA4P34932 840 aa21.07■□□□□ 0.96
FAM3A-222ENST00000621967 CLCN1P35523 988 aa21.07■□□□□ 0.96
FAM3A-222ENST00000621967 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
FAM3A-222ENST00000621967 TCHHQ07283 1943 aa21.06■□□□□ 0.96
FAM3A-222ENST00000621967 AFDNP55196 1824 aaKnown RBP21.06■□□□□ 0.96
FAM3A-222ENST00000621967 GPTP24298 496 aa21.06■□□□□ 0.96
FAM3A-222ENST00000621967 RAD50Q92878 1312 aa21.05■□□□□ 0.96
FAM3A-222ENST00000621967 ALDH1L1O75891 902 aa21.05■□□□□ 0.96
FAM3A-222ENST00000621967 BRD1O95696 1058 aa21.05■□□□□ 0.96
FAM3A-222ENST00000621967 IGKV5-2P06315 115 aa21.05■□□□□ 0.96
FAM3A-222ENST00000621967 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
FAM3A-222ENST00000621967 NEURL1BA8MQ27 555 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 SGSM2O43147 1006 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
FAM3A-222ENST00000621967 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 GYS1P13807 737 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 ZSCAN23Q3MJ62 389 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
FAM3A-222ENST00000621967 CAVIN1Q6NZI2 390 aaKnown RBP21.03■□□□□ 0.96
FAM3A-222ENST00000621967 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
FAM3A-222ENST00000621967 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
FAM3A-222ENST00000621967 PPP1R9BQ96SB3 815 aa21.03■□□□□ 0.96
FAM3A-222ENST00000621967 CWC25Q9NXE8 425 aaPredicted RBP21.03■□□□□ 0.96
FAM3A-222ENST00000621967 PRPF40AO75400 957 aaKnown RBP21.02■□□□□ 0.96
FAM3A-222ENST00000621967 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
FAM3A-222ENST00000621967 CCDC191Q8NCU4 936 aa21.02■□□□□ 0.96
FAM3A-222ENST00000621967 GPT2Q8TD30 523 aa21.02■□□□□ 0.96
FAM3A-222ENST00000621967 NASPP49321 788 aaPredicted RBP21.02■□□□□ 0.95
FAM3A-222ENST00000621967 CCDC173Q0VFZ6 552 aa21.02■□□□□ 0.95
FAM3A-222ENST00000621967 TRIM28Q13263 835 aaKnown RBP21.02■□□□□ 0.95
FAM3A-222ENST00000621967 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.95
FAM3A-222ENST00000621967 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.95
FAM3A-222ENST00000621967 GCKRQ14397 625 aa21.01■□□□□ 0.95
FAM3A-222ENST00000621967 R3HDM1Q15032 1099 aaKnown RBP21.01■□□□□ 0.95
FAM3A-222ENST00000621967 PARP10Q53GL7 1025 aa21.01■□□□□ 0.95
FAM3A-222ENST00000621967 NLRP10Q86W26 655 aa21.01■□□□□ 0.95
FAM3A-222ENST00000621967 SETDB2Q96T68 719 aa21.01■□□□□ 0.95
FAM3A-222ENST00000621967 LSG1Q9H089 658 aaKnown RBP21.01■□□□□ 0.95
FAM3A-222ENST00000621967 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
FAM3A-222ENST00000621967 UPF3BQ9BZI7 483 aaKnown RBP21■□□□□ 0.95
FAM3A-222ENST00000621967 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
FAM3A-222ENST00000621967 ESPNB1AK53 854 aa21■□□□□ 0.95
FAM3A-222ENST00000621967 GLRX3O76003 335 aaKnown RBP21■□□□□ 0.95
FAM3A-222ENST00000621967 MAP4K4O95819 1239 aaPredicted RBP21■□□□□ 0.95
FAM3A-222ENST00000621967 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
FAM3A-222ENST00000621967 ZBTB4Q9P1Z0 1013 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms