RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 ZNF131P52739 623 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
CLTC-215ENST00000621829 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
CLTC-215ENST00000621829 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
CLTC-215ENST00000621829 TRIM4Q9C037 500 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
CLTC-215ENST00000621829 DMTNQ08495 405 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 NEK11Q8NG66 645 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 DDX12PQ92771 950 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 FERMT2Q96AC1 680 aa13.2□□□□□ -0.3
CLTC-215ENST00000621829 RPSAP08865 295 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 ARFGAP2Q8N6H7 521 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 CCDC77Q9BR77 488 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 TUBB4BP68371 445 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 SH2D4BQ5SQS7 431 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 COG7P83436 770 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 CETN3O15182 167 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 DNM1Q05193 864 aaKnown RBP13.19□□□□□ -0.3
CLTC-215ENST00000621829 KIF5AQ12840 1032 aa13.19□□□□□ -0.3
CLTC-215ENST00000621829 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
CLTC-215ENST00000621829 IGHDP01880 384 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 KRT86O43790 486 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 E7EVH7 732 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 TUBB4AP04350 444 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 RLBP1P12271 317 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 PSMD6Q15008 389 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 LRRC43Q8N309 656 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
CLTC-215ENST00000621829 MUM1Q2TAK8 710 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
CLTC-215ENST00000621829 ACTN2P35609 894 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 PRR16Q569H4 304 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 TSHZ3Q63HK5 1081 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
CLTC-215ENST00000621829 NLRP5P59047 1200 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
CLTC-215ENST00000621829 OPHN1O60890 802 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 SMIM24O75264 130 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
CLTC-215ENST00000621829 LIG3P49916 1009 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 IDEP14735 1019 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 DBN1Q16643 649 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 CCDC110Q8TBZ0 833 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
CLTC-215ENST00000621829 GJC1P36383 396 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
CLTC-215ENST00000621829 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
CLTC-215ENST00000621829 KRT83P78385 493 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 NUF2Q9BZD4 464 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 CABS1Q96KC9 395 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
CLTC-215ENST00000621829 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
CLTC-215ENST00000621829 RAB3GAP1Q15042 981 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 CETN1Q12798 172 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 PLVAPQ9BX97 442 aa13.15□□□□□ -0.3
CLTC-215ENST00000621829 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.3
CLTC-215ENST00000621829 MAP7Q14244 749 aa13.15□□□□□ -0.31
CLTC-215ENST00000621829 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms