RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
POLR2J3-221ENST00000621093 SRGNP10124 158 aa13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 CTSWP56202 376 aa13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 TGFB2P61812 414 aa13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 ANKRD44Q8N8A2 993 aa13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 PLA2G12BQ9BX93 195 aa13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-221ENST00000621093 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 H0YIN7 160 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 GNAI3P08754 354 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 SF3B3Q15393 1217 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 CRY2Q49AN0 593 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
POLR2J3-221ENST00000621093 A0A1B0GUL6 1792 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 CSF1RP07333 972 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 FAM161AQ3B820 660 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 GREM2Q9H772 168 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
POLR2J3-221ENST00000621093 NPR1P16066 1061 aa13.72□□□□□ -0.21
POLR2J3-221ENST00000621093 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
POLR2J3-221ENST00000621093 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
POLR2J3-221ENST00000621093 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
POLR2J3-221ENST00000621093 GNAI2P04899 355 aa13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 CCDC152Q4G0S7 254 aa13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 STYK1Q6J9G0 422 aa13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 RBM17Q96I25 401 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.21
POLR2J3-221ENST00000621093 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 ITGA6P23229 1130 aa13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 DDX46Q7L014 1031 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 CRAMP1Q96RY5 1269 aa13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
POLR2J3-221ENST00000621093 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-221ENST00000621093 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
POLR2J3-221ENST00000621093 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
POLR2J3-221ENST00000621093 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
POLR2J3-221ENST00000621093 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
POLR2J3-221ENST00000621093 FER1L6Q2WGJ9 1857 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 GRAPQ13588 217 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
POLR2J3-221ENST00000621093 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 YBX3P16989 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 ALDH1B1P30837 517 aa13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
POLR2J3-221ENST00000621093 PPEF1O14829 653 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 C21orf2O43822 256 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 MTX1Q13505 466 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
POLR2J3-221ENST00000621093 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 CHMP4BQ9H444 224 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 PCDHB15Q9Y5E8 787 aa13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 SBF1O95248 1867 aa13.65□□□□□ -0.22
POLR2J3-221ENST00000621093 BBOX1O75936 387 aa13.64□□□□□ -0.23
POLR2J3-221ENST00000621093 PTPN12Q05209 780 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-221ENST00000621093 POLA2Q14181 598 aa13.64□□□□□ -0.23
POLR2J3-221ENST00000621093 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
POLR2J3-221ENST00000621093 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
POLR2J3-221ENST00000621093 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 SIL1Q9H173 461 aa13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 SNED1Q8TER0 1413 aa13.63□□□□□ -0.23
POLR2J3-221ENST00000621093 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-221ENST00000621093 GPSM2P81274 684 aa13.62□□□□□ -0.23
POLR2J3-221ENST00000621093 GPR162Q16538 588 aa13.62□□□□□ -0.23
POLR2J3-221ENST00000621093 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
POLR2J3-221ENST00000621093 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-221ENST00000621093 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms