RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 SH3TC1Q8TE82 1336 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 IRS4O14654 1257 aaPredicted RBP9.35□□□□□ -0.91
TVP23A-211ENST00000619408 PHF14O94880 888 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 MX1P20591 662 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 RFC4P35249 363 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 CTSWP56202 376 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 UTP14CQ5TAP6 766 aaKnown RBP9.35□□□□□ -0.91
TVP23A-211ENST00000619408 CLASRPQ8N2M8 674 aaKnown RBP9.35□□□□□ -0.91
TVP23A-211ENST00000619408 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
TVP23A-211ENST00000619408 FAM89AQ96GI7 184 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 GPATCH3Q96I76 525 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 SIL1Q9H173 461 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 IL1RAPL2Q9NP60 686 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 COPRSQ9NQ92 184 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 NARFQ9UHQ1 456 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 LAMB2P55268 1798 aa9.35□□□□□ -0.91
TVP23A-211ENST00000619408 AOX1Q06278 1338 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 TNS1Q9HBL0 1735 aaKnown RBP9.34□□□□□ -0.91
TVP23A-211ENST00000619408 PDE8AO60658 829 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 APBA3O96018 575 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 PDE1AP54750 535 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 CCDC57Q2TAC2 916 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 TTC22Q5TAA0 569 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 SUSD4Q5VX71 490 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 C16orf71Q8IYS4 520 aaPredicted RBP9.34□□□□□ -0.91
TVP23A-211ENST00000619408 NAP1L5Q96NT1 182 aaPredicted RBP9.34□□□□□ -0.91
TVP23A-211ENST00000619408 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 RGPD3A6NKT7 1758 aaPredicted RBP9.34□□□□□ -0.91
TVP23A-211ENST00000619408 RGPD4Q7Z3J3 1758 aa9.34□□□□□ -0.91
TVP23A-211ENST00000619408 USP42Q9H9J4 1324 aaKnown RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 PLSCR1O15162 318 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 NTSR2O95665 410 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 IFIT2P09913 472 aaKnown RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 RFX5P48382 616 aaPredicted RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 IFIT5Q13325 482 aaKnown RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 OTUD7AQ8TE49 926 aaPredicted RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 NYXQ9GZU5 481 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 UPF2Q9HAU5 1272 aaKnown RBP9.33□□□□□ -0.92
TVP23A-211ENST00000619408 COL24A1Q17RW2 1714 aa9.33□□□□□ -0.92
TVP23A-211ENST00000619408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
TVP23A-211ENST00000619408 ANKRD18BA2A2Z9 1011 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 CIAO1O76071 339 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 SSFA2P28290 1259 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 AACSQ86V21 672 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 KLHDC4Q8TBB5 520 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
TVP23A-211ENST00000619408 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
TVP23A-211ENST00000619408 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 STAP2Q9UGK3 403 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 SRP68Q9UHB9 627 aaKnown RBP9.32□□□□□ -0.92
TVP23A-211ENST00000619408 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 MYH3P11055 1940 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
TVP23A-211ENST00000619408 TTC41PQ6P2S7 1318 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 LRP5O75197 1615 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 EYA2O00167 538 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 ERC2O15083 957 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 NPHP1O15259 732 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 CDC45O75419 566 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 SASH1O94885 1247 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 CSF1RP07333 972 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 GSPT1P15170 499 aaKnown RBP9.31□□□□□ -0.92
TVP23A-211ENST00000619408 ITGA6P23229 1130 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
TVP23A-211ENST00000619408 IL15P40933 162 aaPredicted RBP9.31□□□□□ -0.92
TVP23A-211ENST00000619408 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 TBC1D9BQ66K14 1250 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 SYNE4Q8N205 404 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
TVP23A-211ENST00000619408 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
TVP23A-211ENST00000619408 RTL9Q8NET4 1388 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 GOLGA6L3A6NEY3 463 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 GLRX3O76003 335 aaKnown RBP9.3□□□□□ -0.92
TVP23A-211ENST00000619408 HCLS1P14317 486 aaPredicted RBP9.3□□□□□ -0.92
TVP23A-211ENST00000619408 TFCP2Q12800 502 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 SF3B2Q13435 895 aaKnown RBP9.3□□□□□ -0.92
TVP23A-211ENST00000619408 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
TVP23A-211ENST00000619408 CCDC85AQ96PX6 553 aaPredicted RBP9.3□□□□□ -0.92
TVP23A-211ENST00000619408 GREM2Q9H772 168 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 BCL2L12Q9HB09 334 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 TFCP2L1Q9NZI6 479 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 PRDM4Q9UKN5 801 aa9.3□□□□□ -0.92
TVP23A-211ENST00000619408 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
TVP23A-211ENST00000619408 KIF20AO95235 890 aa9.29□□□□□ -0.92
TVP23A-211ENST00000619408 SDSP20132 328 aa9.29□□□□□ -0.92
TVP23A-211ENST00000619408 PTMSP20962 102 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms