RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 FCHSD2O94868 740 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 ITPK1Q13572 414 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 NUDT18Q6ZVK8 323 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 FBXW7Q969H0 707 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 EPAS1Q99814 870 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 YBX3P16989 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
CBWD3-215ENST00000619322 FKBP1AP62942 108 aaKnown RBP7.35□□□□□ -1.23
CBWD3-215ENST00000619322 CCDC102AQ96A19 550 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 SLC4A9Q96Q91 983 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 BRIP1Q9BX63 1249 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 COL11A1P12107 1806 aaPredicted RBP7.35□□□□□ -1.23
CBWD3-215ENST00000619322 KDM2BQ8NHM5 1336 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 CNTNAP1P78357 1384 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 CCDC27Q2M243 656 aa7.35□□□□□ -1.23
CBWD3-215ENST00000619322 GNPATO15228 680 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 HRO43593 1189 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 PRSS12P56730 875 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
CBWD3-215ENST00000619322 C15orf52Q6ZUT6 534 aaKnown RBP7.34□□□□□ -1.23
CBWD3-215ENST00000619322 ANP32EQ9BTT0 268 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 RSPH6AQ9H0K4 717 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 TMOD3Q9NYL9 352 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 RPAP1Q9BWH6 1393 aaPredicted RBP7.34□□□□□ -1.23
CBWD3-215ENST00000619322 COL4A5P29400 1685 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 MGAMO43451 1857 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 PLEKHF1Q96S99 279 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 IL16Q14005 1332 aa7.34□□□□□ -1.23
CBWD3-215ENST00000619322 AMPHP49418 695 aa7.34□□□□□ -1.24
CBWD3-215ENST00000619322 CRAMP1Q96RY5 1269 aa7.34□□□□□ -1.24
CBWD3-215ENST00000619322 KIF16BQ96L93 1317 aa7.34□□□□□ -1.24
CBWD3-215ENST00000619322 PITPNM2Q9BZ72 1349 aa7.33□□□□□ -1.24
CBWD3-215ENST00000619322 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
CBWD3-215ENST00000619322 TRIM6-TRIM34B2RNG4 842 aa7.33□□□□□ -1.24
CBWD3-215ENST00000619322 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
CBWD3-215ENST00000619322 BHMG1C9JSJ3 638 aaPredicted RBP7.32□□□□□ -1.24
CBWD3-215ENST00000619322 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
CBWD3-215ENST00000619322 ADGRG1Q9Y653 693 aa7.32□□□□□ -1.24
CBWD3-215ENST00000619322 RASSF10A6NK89 507 aa7.32□□□□□ -1.24
CBWD3-215ENST00000619322 METTL3Q86U44 580 aaKnown RBP7.32□□□□□ -1.24
CBWD3-215ENST00000619322 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
CBWD3-215ENST00000619322 RTCBQ9Y3I0 505 aaKnown RBP7.32□□□□□ -1.24
CBWD3-215ENST00000619322 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
CBWD3-215ENST00000619322 ABCC12Q96J65 1359 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 CDK5RAP2Q96SN8 1893 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 FZD9O00144 591 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 CA12O43570 354 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 PDE6BP35913 854 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 KLRG1Q96E93 195 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 DOCK1Q14185 1865 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 CAMTA2O94983 1202 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 BCAMP50895 628 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 HIC1Q14526 733 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 PTF1AQ7RTS3 328 aa7.31□□□□□ -1.24
CBWD3-215ENST00000619322 TRAPPC3LQ5T215 181 aa7.3□□□□□ -1.24
CBWD3-215ENST00000619322 SIN3AQ96ST3 1273 aa7.3□□□□□ -1.24
CBWD3-215ENST00000619322 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
CBWD3-215ENST00000619322 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
CBWD3-215ENST00000619322 SPNS2Q8IVW8 549 aa7.3□□□□□ -1.24
CBWD3-215ENST00000619322 LMNB1P20700 586 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 TMED8Q6PL24 325 aaPredicted RBP7.29□□□□□ -1.24
CBWD3-215ENST00000619322 GLTPD2A6NH11 291 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 IRF6O14896 467 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 RALBP1Q15311 655 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 TATDN2Q93075 761 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 ZNF496Q96IT1 587 aaPredicted RBP7.29□□□□□ -1.24
CBWD3-215ENST00000619322 PIM2Q9P1W9 311 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 PARP14Q460N5 1801 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 DDR1Q08345 913 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 PARP10Q53GL7 1025 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 CNKSR1Q969H4 720 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 ZCCHC17Q9NP64 241 aaKnown RBP7.29□□□□□ -1.24
CBWD3-215ENST00000619322 PODXL2Q9NZ53 605 aa7.29□□□□□ -1.24
CBWD3-215ENST00000619322 PTPRFP10586 1907 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 GREB1LQ9C091 1923 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 PSDA5PKW4 1024 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 RTKN2Q8IZC4 609 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 ATAD5Q96QE3 1844 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 CRKLP46109 303 aaKnown RBP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 PRELPP51888 382 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 FKBP4Q02790 459 aaKnown RBP eCLIP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 PXYLP1Q8TE99 480 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
CBWD3-215ENST00000619322 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-215ENST00000619322 FKBP1BP68106 108 aa7.27□□□□□ -1.24
CBWD3-215ENST00000619322 SMYD5Q6GMV2 418 aa7.27□□□□□ -1.24
CBWD3-215ENST00000619322 SAMD7Q7Z3H4 446 aa7.27□□□□□ -1.24
CBWD3-215ENST00000619322 LDHDQ86WU2 507 aa7.27□□□□□ -1.24
CBWD3-215ENST00000619322 ZNF34Q8IZ26 560 aa7.27□□□□□ -1.24
CBWD3-215ENST00000619322 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.27□□□□□ -1.25
CBWD3-215ENST00000619322 RNF40O75150 1001 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 ZNF853P0CG23 659 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 NPR1P16066 1061 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 RPS12P25398 132 aaKnown RBP7.27□□□□□ -1.25
CBWD3-215ENST00000619322 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms