RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 GNAI3P08754 354 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 FLIIQ13045 1269 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 DCCP43146 1447 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 FEZ1Q99689 392 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 MTMR6Q9Y217 621 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CTNNA3Q9UI47 895 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 KDRP35968 1356 aa16.16■□□□□ 0.18
CNTNAP3B-215ENST00000619138 SMC2O95347 1197 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ANAPC15P60006 121 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 SIL1Q9H173 461 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 PTH1RQ03431 593 aa16.15■□□□□ 0.18
CNTNAP3B-215ENST00000619138 HSPA4P34932 840 aa16.14■□□□□ 0.17
CNTNAP3B-215ENST00000619138 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ZNF75DP51815 510 aa16.14■□□□□ 0.17
CNTNAP3B-215ENST00000619138 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RPAP1Q9BWH6 1393 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 BIN1O00499 593 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NR1I2O75469 434 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ME3Q16798 604 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TIGD1Q96MW7 591 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 IFIT2P09913 472 aaKnown RBP16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TCHHQ07283 1943 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ERCC6LQ2NKX8 1250 aa16.13■□□□□ 0.17
CNTNAP3B-215ENST00000619138 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TOM1O60784 492 aa16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 SOS2Q07890 1332 aaPredicted RBP16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TTC5Q8N0Z6 440 aa16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RHPN1Q8TCX5 695 aa16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PA2G4Q9UQ80 394 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NOL10Q9BSC4 688 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RGS12O14924 1447 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 KIF18AQ8NI77 898 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PTPRCP08575 1304 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 CABP4P57796 275 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ATP8B2P98198 1209 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 LTN1O94822 1766 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
CNTNAP3B-215ENST00000619138 SGSM2O43147 1006 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 IRX5P78411 483 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 HSP90AA4PQ58FG1 418 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 BOLA2Q9H3K6 86 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NFAT5O94916 1531 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 JAK2O60674 1132 aa16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
CNTNAP3B-215ENST00000619138 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PAXBP1Q9Y5B6 917 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TERF2Q15554 542 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 TPCN1Q9ULQ1 816 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 SLFN14P0C7P3 912 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 CLASRPQ8N2M8 674 aaKnown RBP16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 FAM227BQ96M60 508 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RAD50Q92878 1312 aa16.09■□□□□ 0.17
CNTNAP3B-215ENST00000619138 DLG5Q8TDM6 1919 aa16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 NDUFB9Q9Y6M9 179 aa16.08■□□□□ 0.17
CNTNAP3B-215ENST00000619138 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 MYL6BP14649 208 aa16.08■□□□□ 0.16
CNTNAP3B-215ENST00000619138 ME1P48163 572 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms