RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 MAPKBP1O60336 1514 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 TTC14Q96N46 770 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 LSG1Q9H089 658 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 LIMCH1Q9UPQ0 1083 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 GTF2F1P35269 517 aaKnown RBP eCLIP3.54□□□□□ -1.84
NEB-220ENST00000618972 AK2P54819 239 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 KARSQ15046 597 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 FAN1Q9Y2M0 1017 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 GJB2P29033 226 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 RBBP5Q15291 538 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 CEP63Q96MT8 703 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 MAGEC2Q9UBF1 373 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 ERBINQ96RT1 1412 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 FOXN1O15353 648 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 SRGAP3O43295 1099 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 MARCH6O60337 910 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 USO1O60763 962 aaKnown RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 SASH1O94885 1247 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CTAGE1Q96RT6 745 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 SENP2Q9HC62 589 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 POLD4Q9HCU8 107 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 CCDC73Q6ZRK6 1079 aa3.54□□□□□ -1.84
NEB-220ENST00000618972 APLFQ8IW19 511 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 RPAP2Q8IXW5 612 aaPredicted RBP3.54□□□□□ -1.84
NEB-220ENST00000618972 TRIM66O15016 1216 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CCDC30Q5VVM6 783 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CEP112Q8N8E3 955 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 FOXP4Q8IVH2 680 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 GTF3C6Q969F1 213 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 DNAI2Q9GZS0 605 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 SOS1Q07889 1333 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 INSRP06213 1382 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TMEM232C9JQI7 657 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TMTC2Q8N394 836 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 RHPN1Q8TCX5 695 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 STAMBPO95630 424 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CCDC24Q8N4L8 307 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TYRO3Q06418 890 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 DNAJC8O75937 253 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 ANO6Q4KMQ2 910 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 GRAMD1CQ8IYS0 662 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 EEF2KMTQ96G04 330 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TACC1O75410 805 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ST3GAL1Q11201 340 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 STIM1Q13586 685 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 NBPF11Q86T75 865 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TLR7Q9NYK1 1049 aaKnown RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 IFI16Q16666 785 aaKnown RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 CCDC155Q8N6L0 562 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 PCMTD1Q96MG8 357 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 RAI14Q9P0K7 980 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 LCMT1Q9UIC8 334 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 BATF3Q9NR55 127 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ZSCAN22P10073 491 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 APOBRQ0VD83 1088 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 PPP2R5EQ16537 467 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 LONRF3Q496Y0 759 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 STAMQ92783 540 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 RB1CC1Q8TDY2 1594 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 GNAI1P63096 354 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 COG3Q96JB2 828 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ZNF215Q9UL58 517 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 PTPRGP23470 1445 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 GTF2E1P29083 439 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 NAP1L1P55209 391 aaKnown RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 MAP7Q14244 749 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 LRCH2Q5VUJ6 765 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ZMYND10O75800 440 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 RPUSD2Q8IZ73 545 aaKnown RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 RMDN2Q96LZ7 410 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ZSCAN16Q9H4T2 348 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 YEATS4O95619 227 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ERCC6LQ2NKX8 1250 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 ARMC9Q7Z3E5 817 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 C16orf45Q96MC5 204 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 PARD3Q8TEW0 1356 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 A1BGP04217 495 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 IRX2Q9BZI1 471 aaPredicted RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 TTC6Q86TZ1 520 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CEP57L1Q8IYX8 460 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CLIC4Q9Y696 253 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 CASTP20810 708 aaKnown RBP3.53□□□□□ -1.84
NEB-220ENST00000618972 SUCLG2Q96I99 432 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 RPGRIP1Q96KN7 1286 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
NEB-220ENST00000618972 MTMR7Q9Y216 660 aa3.53□□□□□ -1.85
NEB-220ENST00000618972 STX6O43752 255 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 NR1I2O75469 434 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SERPINC1P01008 464 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 C11orf57Q6ZUT1 292 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 C9orf78Q9NZ63 289 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 CHRNA2Q15822 529 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 FHAD1B1AJZ9 1412 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 MYO1BO43795 1136 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 ZNF500O60304 480 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 CASP1P29466 404 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CREB3L3Q68CJ9 461 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 EIF2AQ9BY44 585 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 HYPKQ9NX55 129 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms