RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 TIMM10P62072 90 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 UBE2HP62256 183 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
TP53-223ENST00000618944 MPNDQ8N594 471 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 TMEM87AQ8NBN3 555 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
TP53-223ENST00000618944 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 CASP7P55210 303 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 CCDC183Q5T5S1 534 aa13.37□□□□□ -0.27
TP53-223ENST00000618944 FOXO4P98177 505 aa13.36□□□□□ -0.27
TP53-223ENST00000618944 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
TP53-223ENST00000618944 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
TP53-223ENST00000618944 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
TP53-223ENST00000618944 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
TP53-223ENST00000618944 C5P01031 1676 aa13.36□□□□□ -0.27
TP53-223ENST00000618944 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
TP53-223ENST00000618944 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
TP53-223ENST00000618944 CDC37L1Q7L3B6 337 aa13.35□□□□□ -0.27
TP53-223ENST00000618944 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
TP53-223ENST00000618944 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
TP53-223ENST00000618944 COL15A1P39059 1388 aa13.35□□□□□ -0.27
TP53-223ENST00000618944 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
TP53-223ENST00000618944 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
TP53-223ENST00000618944 H7C1W4 665 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 GOLIM4O00461 696 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 HAUS7Q99871 368 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
TP53-223ENST00000618944 CWC25Q9NXE8 425 aaPredicted RBP13.34□□□□□ -0.27
TP53-223ENST00000618944 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.27
TP53-223ENST00000618944 HCLS1P14317 486 aaPredicted RBP13.33□□□□□ -0.27
TP53-223ENST00000618944 MCMDC2Q4G0Z9 681 aa13.33□□□□□ -0.27
TP53-223ENST00000618944 LRRC24Q50LG9 513 aa13.33□□□□□ -0.27
TP53-223ENST00000618944 HS1BP3Q53T59 392 aa13.33□□□□□ -0.27
TP53-223ENST00000618944 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.27
TP53-223ENST00000618944 BRINP3Q76B58 766 aa13.33□□□□□ -0.28
TP53-223ENST00000618944 ATG9AQ7Z3C6 839 aa13.33□□□□□ -0.28
TP53-223ENST00000618944 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
TP53-223ENST00000618944 LMTK3Q96Q04 1460 aa13.33□□□□□ -0.28
TP53-223ENST00000618944 JAK2O60674 1132 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
TP53-223ENST00000618944 HMG20BQ9P0W2 317 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 TCHHQ07283 1943 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 ZNF609O15014 1411 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 CYP21A2P08686 494 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 HSP90B1P14625 803 aaKnown RBP13.32□□□□□ -0.28
TP53-223ENST00000618944 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 Q6ZUG5 572 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
TP53-223ENST00000618944 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
TP53-223ENST00000618944 CSPP1Q1MSJ5 1256 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
TP53-223ENST00000618944 FGD1P98174 961 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 TTC6Q86TZ1 520 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 COL18A1P39060 1754 aa13.31□□□□□ -0.28
TP53-223ENST00000618944 A0A0G2JLW4 131 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 EVA1CP58658 441 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 KRT32Q14532 448 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 CAMK4Q16566 473 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 ZNF830Q96NB3 372 aaPredicted RBP13.3□□□□□ -0.28
TP53-223ENST00000618944 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
TP53-223ENST00000618944 ERVV-2B6SEH9 535 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 OFD1O75665 1012 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 PDCP20941 246 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 KRT85P78386 507 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 BRF1Q92994 677 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 ALDH8A1Q9H2A2 487 aaPredicted RBP13.3□□□□□ -0.28
TP53-223ENST00000618944 CPDO75976 1380 aa13.3□□□□□ -0.28
TP53-223ENST00000618944 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 FOSBP53539 338 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 MRC1P22897 1456 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 ADCY5O95622 1261 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 IL2RBP14784 551 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 LIG1P18858 919 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 IL15P40933 162 aaPredicted RBP13.29□□□□□ -0.28
TP53-223ENST00000618944 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
TP53-223ENST00000618944 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
TP53-223ENST00000618944 EYA2O00167 538 aa13.28□□□□□ -0.28
TP53-223ENST00000618944 IFIT1P09914 478 aaKnown RBP13.28□□□□□ -0.28
TP53-223ENST00000618944 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
TP53-223ENST00000618944 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms