RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 HOXA10P31260 410 aaPredicted RBP8.98□□□□□ -0.97
SNX25-207ENST00000618785 RTL5Q5HYW3 569 aaPredicted RBP8.98□□□□□ -0.97
SNX25-207ENST00000618785 SYNE4Q8N205 404 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 H7C1W4 665 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 EIF5BO60841 1220 aaKnown RBP8.98□□□□□ -0.97
SNX25-207ENST00000618785 CRAMP1Q96RY5 1269 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 GTF3C3Q9Y5Q9 886 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 DLEC1Q9Y238 1755 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 PDE8AO60658 829 aa8.98□□□□□ -0.97
SNX25-207ENST00000618785 SF3B3Q15393 1217 aaKnown RBP8.98□□□□□ -0.97
SNX25-207ENST00000618785 TNRC6CQ9HCJ0 1690 aaKnown RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
SNX25-207ENST00000618785 DDX46Q7L014 1031 aaKnown RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 UBE3BQ7Z3V4 1068 aa8.97□□□□□ -0.97
SNX25-207ENST00000618785 COL11A2P13942 1736 aaPredicted RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 BCAR3O75815 825 aa8.97□□□□□ -0.97
SNX25-207ENST00000618785 CCT4P50991 539 aaKnown RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 C3orf67Q6ZVT6 689 aa8.97□□□□□ -0.97
SNX25-207ENST00000618785 C9orf78Q9NZ63 289 aaPredicted RBP8.97□□□□□ -0.97
SNX25-207ENST00000618785 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.97
SNX25-207ENST00000618785 GRM8O00222 908 aa8.96□□□□□ -0.97
SNX25-207ENST00000618785 ARHGAP27Q6ZUM4 889 aa8.96□□□□□ -0.97
SNX25-207ENST00000618785 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.97
SNX25-207ENST00000618785 CCDC152Q4G0S7 254 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 ZKSCAN2Q63HK3 967 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.98
SNX25-207ENST00000618785 FRAT1Q92837 279 aaPredicted RBP8.96□□□□□ -0.98
SNX25-207ENST00000618785 TMX4Q9H1E5 349 aaPredicted RBP8.96□□□□□ -0.98
SNX25-207ENST00000618785 CC2D2BQ6DHV5 1058 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 ATF7IPQ6VMQ6 1270 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 PLA2G12BQ9BX93 195 aa8.96□□□□□ -0.98
SNX25-207ENST00000618785 C21orf2O43822 256 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 BBOX1O75936 387 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 CTSWP56202 376 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 TMC4Q7Z404 712 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 CASP7P55210 303 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 GRAPQ13588 217 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 GRAPLQ8TC17 118 aaPredicted RBP8.95□□□□□ -0.98
SNX25-207ENST00000618785 ZNF219Q9P2Y4 722 aaPredicted RBP8.95□□□□□ -0.98
SNX25-207ENST00000618785 RCAN3Q9UKA8 241 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 ABCC4O15439 1325 aa8.95□□□□□ -0.98
SNX25-207ENST00000618785 LAMB2P55268 1798 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 PPEF1O14829 653 aaPredicted RBP8.94□□□□□ -0.98
SNX25-207ENST00000618785 GRIPAP1Q4V328 841 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 DDX60Q8IY21 1712 aaKnown RBP8.94□□□□□ -0.98
SNX25-207ENST00000618785 TRIM27P14373 513 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 HDAC5Q9UQL6 1122 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 MS4A1P11836 297 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 RTKN2Q8IZC4 609 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 TTLL11Q8NHH1 800 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
SNX25-207ENST00000618785 UTYO14607 1347 aa8.93□□□□□ -0.98
SNX25-207ENST00000618785 RTL9Q8NET4 1388 aa8.93□□□□□ -0.98
SNX25-207ENST00000618785 INTS3Q68E01 1043 aaKnown RBP8.93□□□□□ -0.98
SNX25-207ENST00000618785 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
SNX25-207ENST00000618785 SLX4Q8IY92 1834 aa8.93□□□□□ -0.98
SNX25-207ENST00000618785 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
SNX25-207ENST00000618785 C16orf71Q8IYS4 520 aaPredicted RBP8.93□□□□□ -0.98
SNX25-207ENST00000618785 ATP6V0A2Q9Y487 856 aa8.93□□□□□ -0.98
SNX25-207ENST00000618785 CSF1RP07333 972 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 RPS8P62241 208 aaKnown RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 SP8Q8IXZ3 490 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 LTBP3Q9NS15 1303 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 NBPF7P0C2Y1 421 aaPredicted RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 ANKRD18AQ8IVF6 992 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 DZIP1LQ8IYY4 767 aaKnown RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 CELF1Q92879 486 aaKnown RBP8.92□□□□□ -0.98
SNX25-207ENST00000618785 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 USP44Q9H0E7 712 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 TAOK3Q9H2K8 898 aa8.92□□□□□ -0.98
SNX25-207ENST00000618785 FOXO4P98177 505 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 SUCLG2Q96I99 432 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 SEC31BQ9NQW1 1179 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 CHMP3Q9Y3E7 222 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 NFKBIEO00221 500 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 GNAI3P08754 354 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 UBTFL1P0CB47 393 aaPredicted RBP8.91□□□□□ -0.98
SNX25-207ENST00000618785 FKBP4Q02790 459 aaKnown RBP eCLIP8.91□□□□□ -0.98
SNX25-207ENST00000618785 LMBR1LQ6UX01 489 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 GREM2Q9H772 168 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 LMNB1P20700 586 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 IGHMBP2P38935 993 aaKnown RBP8.91□□□□□ -0.98
SNX25-207ENST00000618785 RASSF7Q02833 373 aa8.91□□□□□ -0.98
SNX25-207ENST00000618785 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
SNX25-207ENST00000618785 CACNA1SQ13698 1873 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 ITGA6P23229 1130 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 TMEM57Q8N5G2 664 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 SUPT20HQ8NEM7 779 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 ABHD8Q96I13 439 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 PSMD1Q99460 953 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 TNNQ9UQP3 1299 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 CCDC57Q2TAC2 916 aa8.9□□□□□ -0.98
SNX25-207ENST00000618785 EPHA10Q5JZY3 1008 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms