RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RPGRQ92834 1020 aaKnown RBP6.19□□□□□ -1.42
SNCA-213ENST00000618500 PANK3Q9H999 370 aa6.19□□□□□ -1.42
SNCA-213ENST00000618500 NIP7Q9Y221 180 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNCA-213ENST00000618500 CXCL9Q07325 125 aa6.19□□□□□ -1.42
SNCA-213ENST00000618500 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
SNCA-213ENST00000618500 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
SNCA-213ENST00000618500 GBA2Q9HCG7 927 aaPredicted RBP6.19□□□□□ -1.42
SNCA-213ENST00000618500 NBPF26B4DH59 902 aa6.18□□□□□ -1.42
SNCA-213ENST00000618500 A1BGP04217 495 aa6.18□□□□□ -1.42
SNCA-213ENST00000618500 HIRAP54198 1017 aaPredicted RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 KIF23Q02241 960 aaPredicted RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 NBPF10Q6P3W6 841 aaKnown RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 GJA3Q9Y6H8 435 aa6.18□□□□□ -1.42
SNCA-213ENST00000618500 SCN9AQ15858 1988 aa6.18□□□□□ -1.42
SNCA-213ENST00000618500 ZNF280AP59817 542 aaPredicted RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 GLIS2Q9BZE0 524 aaPredicted RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 RTN4Q9NQC3 1192 aaKnown RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
SNCA-213ENST00000618500 BTBD11A6QL63 1104 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 NPHP1O15259 732 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 PPIP5K2O43314 1243 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 SOX10P56693 466 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 OTOFQ9HC10 1997 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 ABCC4O15439 1325 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 HUNKP57058 714 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 PAXIP1Q6ZW49 1069 aaPredicted RBP6.17□□□□□ -1.42
SNCA-213ENST00000618500 PPP1R42Q7Z4L9 355 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 BABAM1Q9NWV8 329 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 UBN2Q6ZU65 1347 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 H7C1D1 291 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 FXR1P51114 621 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNCA-213ENST00000618500 TRPM4Q8TD43 1214 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 RSPH6AQ9H0K4 717 aa6.17□□□□□ -1.42
SNCA-213ENST00000618500 MYH3P11055 1940 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 TMX4Q9H1E5 349 aaPredicted RBP6.16□□□□□ -1.42
SNCA-213ENST00000618500 TSKSQ9UJT2 592 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 KNSTRNQ9Y448 316 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 ALDH1A1P00352 501 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 SREBF2Q12772 1141 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 AOC3Q16853 763 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 OLFM4Q6UX06 510 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
SNCA-213ENST00000618500 USP16Q9Y5T5 823 aa6.16□□□□□ -1.42
SNCA-213ENST00000618500 GRAPQ13588 217 aa6.15□□□□□ -1.42
SNCA-213ENST00000618500 HLFQ16534 295 aa6.15□□□□□ -1.42
SNCA-213ENST00000618500 KIF6Q6ZMV9 814 aa6.15□□□□□ -1.42
SNCA-213ENST00000618500 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
SNCA-213ENST00000618500 GRAPLQ8TC17 118 aaPredicted RBP6.15□□□□□ -1.42
SNCA-213ENST00000618500 CNOT7Q9UIV1 285 aaKnown RBP6.15□□□□□ -1.42
SNCA-213ENST00000618500 A0A1W2PPC1 479 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 CCDC24Q8N4L8 307 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 AGBL3Q8NEM8 1001 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 PODXL2Q9NZ53 605 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 YDJCA8MPS7 323 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 PER1O15534 1290 aaPredicted RBP6.15□□□□□ -1.43
SNCA-213ENST00000618500 VIL1P09327 827 aaKnown RBP6.15□□□□□ -1.43
SNCA-213ENST00000618500 DPP8Q6V1X1 898 aaPredicted RBP6.15□□□□□ -1.43
SNCA-213ENST00000618500 USP48Q86UV5 1035 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 MICALL2Q8IY33 904 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 DCPSQ96C86 337 aaKnown RBP6.15□□□□□ -1.43
SNCA-213ENST00000618500 ZIC5Q96T25 663 aa6.15□□□□□ -1.43
SNCA-213ENST00000618500 FKTNO75072 461 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
SNCA-213ENST00000618500 ZNF157P51786 506 aaPredicted RBP6.14□□□□□ -1.43
SNCA-213ENST00000618500 INHBEP58166 350 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 EIF4G2P78344 907 aaKnown RBP eCLIP6.14□□□□□ -1.43
SNCA-213ENST00000618500 SUSD4Q5VX71 490 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 MPNDQ8N594 471 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 CDCA5Q96FF9 252 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 NLRP3Q96P20 1036 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 EYA3Q99504 573 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 RTL9Q8NET4 1388 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 HMOX1P09601 288 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 KRT26Q7Z3Y9 468 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 BCL2L13Q9BXK5 485 aa6.14□□□□□ -1.43
SNCA-213ENST00000618500 GPR25O00155 361 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 ZNF296Q8WUU4 475 aaPredicted RBP6.13□□□□□ -1.43
SNCA-213ENST00000618500 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
SNCA-213ENST00000618500 KCNQ3O43525 872 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 SF3B3Q15393 1217 aaKnown RBP6.13□□□□□ -1.43
SNCA-213ENST00000618500 TAF7Q15545 349 aaPredicted RBP6.13□□□□□ -1.43
SNCA-213ENST00000618500 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 GPR153Q6NV75 609 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 CFAP44Q96MT7 982 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 SPEF2Q9C093 1822 aa6.13□□□□□ -1.43
SNCA-213ENST00000618500 TESPA1A2RU30 521 aaPredicted RBP6.12□□□□□ -1.43
SNCA-213ENST00000618500 GMLQ99445 158 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 MYO3BQ8WXR4 1341 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 TRPA1O75762 1119 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 MNX1P50219 401 aaPredicted RBP6.12□□□□□ -1.43
SNCA-213ENST00000618500 PRO3102Q9H379 93 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 PPP2R3BQ9Y5P8 575 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 PRAMEF22A3QJZ6 481 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 HAX1O00165 279 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 PSMD14O00487 310 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms