RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
CIITA-213ENST00000618327 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 ADGRB1O14514 1584 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 CHMLP26374 656 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 ME1P48163 572 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
CIITA-213ENST00000618327 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 RNF214Q8ND24 703 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
CIITA-213ENST00000618327 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 SEC24BO95487 1268 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
CIITA-213ENST00000618327 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 KDRP35968 1356 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
CIITA-213ENST00000618327 LDHCP07864 332 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
CIITA-213ENST00000618327 WASF1Q92558 559 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 ITGA6P23229 1130 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
CIITA-213ENST00000618327 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
CIITA-213ENST00000618327 SLC9C2Q5TAH2 1124 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 PDE8AO60658 829 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 TIMM10P62072 90 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
CIITA-213ENST00000618327 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
CIITA-213ENST00000618327 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
CIITA-213ENST00000618327 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
CIITA-213ENST00000618327 NEURL4Q96JN8 1562 aa16.29■□□□□ 0.2
CIITA-213ENST00000618327 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
CIITA-213ENST00000618327 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
CIITA-213ENST00000618327 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.29■□□□□ 0.2
CIITA-213ENST00000618327 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
CIITA-213ENST00000618327 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
CIITA-213ENST00000618327 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
CIITA-213ENST00000618327 TPM2P07951 284 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
CIITA-213ENST00000618327 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 BAG3O95817 575 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 HMGN5P82970 282 aaKnown RBP16.28■□□□□ 0.2
CIITA-213ENST00000618327 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 CYP7A1P22680 504 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 GOLGA8BA8MQT2 603 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 SSFA2P28290 1259 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
CIITA-213ENST00000618327 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 GPS2Q13227 327 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 TECPR2O15040 1411 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 AOX1Q06278 1338 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.2
CIITA-213ENST00000618327 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
CIITA-213ENST00000618327 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
CIITA-213ENST00000618327 TSPY26PQ9H489 355 aa16.27■□□□□ 0.2
CIITA-213ENST00000618327 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.19
CIITA-213ENST00000618327 TPM1P09493 284 aa16.27■□□□□ 0.19
CIITA-213ENST00000618327 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.19
CIITA-213ENST00000618327 OLFM4Q6UX06 510 aa16.27■□□□□ 0.19
CIITA-213ENST00000618327 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.19
CIITA-213ENST00000618327 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 MROH2AA6NES4 1674 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
CIITA-213ENST00000618327 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
CIITA-213ENST00000618327 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 TXLNAP40222 546 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 TSR1Q2NL82 804 aaKnown RBP16.26■□□□□ 0.19
CIITA-213ENST00000618327 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
CIITA-213ENST00000618327 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
CIITA-213ENST00000618327 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
CIITA-213ENST00000618327 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 RAD50Q92878 1312 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 CRNKL1Q9BZJ0 848 aaKnown RBP16.25■□□□□ 0.19
CIITA-213ENST00000618327 CEP170BQ9Y4F5 1589 aaPredicted RBP16.25■□□□□ 0.19
CIITA-213ENST00000618327 MCM5P33992 734 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 ZGPATQ8N5A5 531 aaKnown RBP16.25■□□□□ 0.19
CIITA-213ENST00000618327 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 BRF1Q92994 677 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 ANKRD2Q9GZV1 360 aa16.25■□□□□ 0.19
CIITA-213ENST00000618327 NSFL1CQ9UNZ2 370 aaKnown RBP16.25■□□□□ 0.19
CIITA-213ENST00000618327 GOLGA8AA7E2F4 631 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms