RNA–Protein interactions for RNA: ENST00000618137.1

NLRC3-205, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 1 (best)

Gene NLRC3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-205ENST00000618137 BBOX1O75936 387 aa15.32■□□□□ 0.04
NLRC3-205ENST00000618137 GRAPQ13588 217 aa15.32■□□□□ 0.04
NLRC3-205ENST00000618137 INTS3Q68E01 1043 aaKnown RBP15.32■□□□□ 0.04
NLRC3-205ENST00000618137 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
NLRC3-205ENST00000618137 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
NLRC3-205ENST00000618137 RTL9Q8NET4 1388 aa15.32■□□□□ 0.04
NLRC3-205ENST00000618137 C21orf2O43822 256 aa15.31■□□□□ 0.04
NLRC3-205ENST00000618137 C7orf43Q8WVR3 580 aa15.31■□□□□ 0.04
NLRC3-205ENST00000618137 JARID2Q92833 1246 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-205ENST00000618137 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-205ENST00000618137 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
NLRC3-205ENST00000618137 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
NLRC3-205ENST00000618137 MS4A1P11836 297 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 TTLL11Q8NHH1 800 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 USP44Q9H0E7 712 aa15.3■□□□□ 0.04
NLRC3-205ENST00000618137 CSF1RP07333 972 aa15.29■□□□□ 0.04
NLRC3-205ENST00000618137 NBPF7P0C2Y1 421 aaPredicted RBP15.29■□□□□ 0.04
NLRC3-205ENST00000618137 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
NLRC3-205ENST00000618137 ATP6V0A2Q9Y487 856 aa15.29■□□□□ 0.04
NLRC3-205ENST00000618137 LTBP3Q9NS15 1303 aa15.28■□□□□ 0.04
NLRC3-205ENST00000618137 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
NLRC3-205ENST00000618137 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
NLRC3-205ENST00000618137 CDC5LQ99459 802 aaKnown RBP15.28■□□□□ 0.04
NLRC3-205ENST00000618137 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
NLRC3-205ENST00000618137 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.04
NLRC3-205ENST00000618137 FOXO4P98177 505 aa15.27■□□□□ 0.04
NLRC3-205ENST00000618137 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.04
NLRC3-205ENST00000618137 GNAI3P08754 354 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
NLRC3-205ENST00000618137 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
NLRC3-205ENST00000618137 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 PSMD1Q99460 953 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 GREM2Q9H772 168 aa15.26■□□□□ 0.03
NLRC3-205ENST00000618137 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
NLRC3-205ENST00000618137 MYH3P11055 1940 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 NFKBIEO00221 500 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 LMNB1P20700 586 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 ITGA6P23229 1130 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
NLRC3-205ENST00000618137 IFIT5Q13325 482 aaKnown RBP15.25■□□□□ 0.03
NLRC3-205ENST00000618137 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-205ENST00000618137 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 SUCLG2Q96I99 432 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 SNED1Q8TER0 1413 aa15.25■□□□□ 0.03
NLRC3-205ENST00000618137 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
NLRC3-205ENST00000618137 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
NLRC3-205ENST00000618137 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
NLRC3-205ENST00000618137 KAZALD1Q96I82 304 aa15.24■□□□□ 0.03
NLRC3-205ENST00000618137 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-205ENST00000618137 BSDC1Q9NW68 430 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-205ENST00000618137 CACNA1SQ13698 1873 aa15.24■□□□□ 0.03
NLRC3-205ENST00000618137 ZC3H4Q9UPT8 1303 aaKnown RBP15.23■□□□□ 0.03
NLRC3-205ENST00000618137 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
NLRC3-205ENST00000618137 CCDC57Q2TAC2 916 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
NLRC3-205ENST00000618137 VPS33BQ9H267 617 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
NLRC3-205ENST00000618137 TNNQ9UQP3 1299 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
NLRC3-205ENST00000618137 PDE3AQ14432 1141 aa15.22■□□□□ 0.03
NLRC3-205ENST00000618137 OLFM4Q6UX06 510 aa15.22■□□□□ 0.03
NLRC3-205ENST00000618137 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
NLRC3-205ENST00000618137 MPNDQ8N594 471 aa15.22■□□□□ 0.03
NLRC3-205ENST00000618137 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
NLRC3-205ENST00000618137 MEIS3Q99687 375 aa15.22■□□□□ 0.03
NLRC3-205ENST00000618137 RLBP1P12271 317 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 RASSF7Q02833 373 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 ANKRD44Q8N8A2 993 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
NLRC3-205ENST00000618137 CHD4Q14839 1912 aa15.21■□□□□ 0.02
NLRC3-205ENST00000618137 YY1P25490 414 aa15.2■□□□□ 0.02
NLRC3-205ENST00000618137 TAF7LQ5H9L4 462 aa15.2■□□□□ 0.02
NLRC3-205ENST00000618137 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
NLRC3-205ENST00000618137 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
NLRC3-205ENST00000618137 COL4A1P02462 1669 aa15.19■□□□□ 0.02
NLRC3-205ENST00000618137 GNAI2P04899 355 aa15.19■□□□□ 0.02
NLRC3-205ENST00000618137 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
NLRC3-205ENST00000618137 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
NLRC3-205ENST00000618137 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
NLRC3-205ENST00000618137 XDHP47989 1333 aa15.18■□□□□ 0.02
NLRC3-205ENST00000618137 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
NLRC3-205ENST00000618137 PLIN1O60240 522 aa15.18■□□□□ 0.02
NLRC3-205ENST00000618137 IARSP41252 1262 aaKnown RBP15.18■□□□□ 0.02
NLRC3-205ENST00000618137 PRELPP51888 382 aa15.18■□□□□ 0.02
NLRC3-205ENST00000618137 MTX1Q13505 466 aa15.18■□□□□ 0.02
NLRC3-205ENST00000618137 MVPQ14764 893 aaKnown RBP15.18■□□□□ 0.02
NLRC3-205ENST00000618137 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
NLRC3-205ENST00000618137 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms