RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 FAM169AQ9Y6X4 670 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 AK9Q5TCS8 1911 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 GCFC2P16383 781 aaKnown RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 DCTN1Q14203 1278 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 BCORL1Q5H9F3 1711 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 ENO4A6NNW6 628 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 TOP1P11387 765 aaKnown RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 CHMP4BP1P59074 171 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 BRD3Q15059 726 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 B4GALNT4Q76KP1 1039 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 DISP3Q9P2K9 1392 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 KIF5CO60282 957 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 ZKSCAN1P17029 563 aaPredicted RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 TMX4Q9H1E5 349 aaPredicted RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 SAMM50Q9Y512 469 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 AP5Z1O43299 807 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 ME1P48163 572 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 KARSQ15046 597 aaKnown RBP8.5□□□□□ -1.05
PDE6A-205ENST00000617647 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 FAM71BQ8TC56 605 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 ATRIPQ8WXE1 791 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 SPDL1Q96EA4 605 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 SAAL1Q96ER3 474 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 PSD3Q9NYI0 1048 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 ZNF219Q9P2Y4 722 aaPredicted RBP8.5□□□□□ -1.05
PDE6A-205ENST00000617647 LIMCH1Q9UPQ0 1083 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 SYNJ2O15056 1496 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 CBFA2T2O43439 604 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 RANBP1P43487 201 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 TACO1Q9BSH4 297 aaKnown RBP8.5□□□□□ -1.05
PDE6A-205ENST00000617647 IFNKQ9P0W0 207 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 ARHGAP25P42331 645 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 MTHFSP49914 203 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 STK3Q13188 491 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC121Q6ZUS5 278 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 ARMCX6Q7L4S7 300 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
PDE6A-205ENST00000617647 KIF14Q15058 1648 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 GOLGA6L9A6NEM1 432 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 BIN1O00499 593 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 BUB1BO60566 1050 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-205ENST00000617647 SCRN1Q12765 414 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 NFXL1Q6ZNB6 911 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 DDX54Q8TDD1 881 aaKnown RBP8.49□□□□□ -1.05
PDE6A-205ENST00000617647 RTEL1-TNFRSF6BF6WH68 1400 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 PLB1Q6P1J6 1458 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CTAGE15A4D2H0 777 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CTAGE8P0CG41 777 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 RWDD2BP57060 319 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 FAM173BQ6P4H8 233 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CTAGE6Q86UF2 777 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CTAGE4Q8IX94 777 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC148Q8NFR7 591 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 ZBTB10Q96DT7 871 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 ETAA1Q9NY74 926 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 GOLGA6CA6NDK9 693 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 SKAP2O75563 359 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-205ENST00000617647 GOLGA6DP0CG33 693 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 KIRREL3Q8IZU9 778 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 TBC1D22AQ8WUA7 517 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 KIF9Q9HAQ2 790 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CD248Q9HCU0 757 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 GOLGA6AQ9NYA3 693 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CDC42BPAQ5VT25 1732 aa8.49□□□□□ -1.05
PDE6A-205ENST00000617647 CTAGE5O15320 804 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 AP1G2O75843 785 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 TBC1D8O95759 1140 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 GSPT1P15170 499 aaKnown RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 RBM5P52756 815 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 SNCBQ16143 134 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 DBN1Q16643 649 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 TSHZ3Q63HK5 1081 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 CPLX2Q6PUV4 134 aaKnown RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 RABGGTAQ92696 567 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 TXLNAP40222 546 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 TRAF1Q13077 416 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 MSL1Q68DK7 614 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 OLFM4Q6UX06 510 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 GDAP1L1Q96MZ0 367 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 ZSCAN16Q9H4T2 348 aaPredicted RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 BIN2Q9UBW5 565 aaPredicted RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 GPATCH8Q9UKJ3 1502 aaKnown RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 ANKRD50Q9ULJ7 1429 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC151A5D8V7 595 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 RNF40O75150 1001 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 MAP4K4O95819 1239 aaPredicted RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 GNGT1P63211 74 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 LRRN4CLQ8ND94 238 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 TDRD7Q8NHU6 1098 aaKnown RBP8.48□□□□□ -1.05
PDE6A-205ENST00000617647 HYPKQ9NX55 129 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 CYP46A1Q9Y6A2 500 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 CEP170Q5SW79 1584 aa8.48□□□□□ -1.05
PDE6A-205ENST00000617647 PZPP20742 1482 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 JAKMIP1Q96N16 626 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms