RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CCDC57Q2TAC2 916 aa25.14■■□□□ 1.62
CNTNAP3B-212ENST00000617422 GPATCH3Q96I76 525 aa25.14■■□□□ 1.62
CNTNAP3B-212ENST00000617422 CTSWP56202 376 aa25.14■■□□□ 1.61
CNTNAP3B-212ENST00000617422 DBNDD2Q9BQY9 259 aa25.13■■□□□ 1.61
CNTNAP3B-212ENST00000617422 IL15P40933 162 aaPredicted RBP25.12■■□□□ 1.61
CNTNAP3B-212ENST00000617422 CNTROBQ8N137 903 aa25.12■■□□□ 1.61
CNTNAP3B-212ENST00000617422 CIAO1O76071 339 aa25.12■■□□□ 1.61
CNTNAP3B-212ENST00000617422 NIP7Q9Y221 180 aaKnown RBP eCLIP25.12■■□□□ 1.61
CNTNAP3B-212ENST00000617422 BOLA2Q9H3K6 86 aa25.11■■□□□ 1.61
CNTNAP3B-212ENST00000617422 DDX60Q8IY21 1712 aaKnown RBP25.11■■□□□ 1.61
CNTNAP3B-212ENST00000617422 HCLS1P14317 486 aaPredicted RBP25.11■■□□□ 1.61
CNTNAP3B-212ENST00000617422 RC3H1Q5TC82 1133 aaKnown RBP25.11■■□□□ 1.61
CNTNAP3B-212ENST00000617422 PDE8AO60658 829 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 REC8O95072 547 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 ITGA6P23229 1130 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 TIMM10P62072 90 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 IFIT5Q13325 482 aaKnown RBP25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 BCL11BQ9C0K0 894 aaPredicted RBP25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 BCL2L12Q9HB09 334 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 NTSR2O95665 410 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 SCN7AQ01118 1682 aa25.1■■□□□ 1.61
CNTNAP3B-212ENST00000617422 SH3TC1Q8TE82 1336 aa25.09■■□□□ 1.61
CNTNAP3B-212ENST00000617422 UTP14AQ9BVJ6 771 aaKnown RBP25.09■■□□□ 1.61
CNTNAP3B-212ENST00000617422 LRRC4BQ9NT99 713 aa25.09■■□□□ 1.61
CNTNAP3B-212ENST00000617422 GNPATO15228 680 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 RPS6KA4O75676 772 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 NDUFB9Q9Y6M9 179 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 ZNF609O15014 1411 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 BECN1Q14457 450 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 EDC3Q96F86 508 aaKnown RBP25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
CNTNAP3B-212ENST00000617422 CD2BP2O95400 341 aaKnown RBP25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 PARP10Q53GL7 1025 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 GPR108Q9NPR9 543 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 C4BP0C0L5 1744 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 EIF5BO60841 1220 aaKnown RBP25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 CLEC4GQ6UXB4 293 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 EVI5LQ96CN4 794 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 RIC1Q4ADV7 1423 aa25.07■■□□□ 1.6
CNTNAP3B-212ENST00000617422 ATP5JP18859 108 aa25.06■■□□□ 1.6
CNTNAP3B-212ENST00000617422 SGSM2O43147 1006 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 NEUROD6Q96NK8 337 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 RIPOR2Q9Y4F9 1068 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 TAF7LQ5H9L4 462 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 USPL1Q5W0Q7 1092 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 CWC27Q6UX04 472 aaKnown RBP25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 ZNF652Q9Y2D9 606 aa25.05■■□□□ 1.6
CNTNAP3B-212ENST00000617422 FBXO3Q9UK99 471 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 LAMB2P55268 1798 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 A0A1B0GUL7 405 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 ANKRD18BA2A2Z9 1011 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 TBC1D9BQ66K14 1250 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 NARFQ9UHQ1 456 aa25.04■■□□□ 1.6
CNTNAP3B-212ENST00000617422 CEP126Q9P2H0 1117 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 COL4A1P02462 1669 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 C4AP0C0L4 1744 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 TRIM37O94972 964 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 LDHAL6AQ6ZMR3 332 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 AK7Q96M32 723 aa25.03■■□□□ 1.6
CNTNAP3B-212ENST00000617422 LRP5O75197 1615 aa25.02■■□□□ 1.6
CNTNAP3B-212ENST00000617422 BICDL1Q6ZP65 573 aa25.02■■□□□ 1.6
CNTNAP3B-212ENST00000617422 IL27Q8NEV9 243 aa25.02■■□□□ 1.6
CNTNAP3B-212ENST00000617422 ARHGEF1Q92888 912 aaKnown RBP25.02■■□□□ 1.6
CNTNAP3B-212ENST00000617422 PALD1Q9ULE6 856 aa25.02■■□□□ 1.6
CNTNAP3B-212ENST00000617422 SNX21Q969T3 373 aa25.01■■□□□ 1.59
CNTNAP3B-212ENST00000617422 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
CNTNAP3B-212ENST00000617422 RTCBQ9Y3I0 505 aaKnown RBP25.01■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ADORA1P30542 326 aa25.01■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ERFEQ4G0M1 354 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 C3orf67Q6ZVT6 689 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 FAM227BQ96M60 508 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 DIAPH3Q9NSV4 1193 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 CASZ1Q86V15 1759 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 RBM6P78332 1123 aaKnown RBP25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 VGLL2Q8N8G2 317 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 HAUS7Q99871 368 aa25■■□□□ 1.59
CNTNAP3B-212ENST00000617422 CHGBP05060 677 aa24.99■■□□□ 1.59
CNTNAP3B-212ENST00000617422 LSG1Q9H089 658 aaKnown RBP24.99■■□□□ 1.59
CNTNAP3B-212ENST00000617422 FRAT2O75474 233 aaPredicted RBP24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 DNAJC2Q99543 621 aaKnown RBP24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 PHF14O94880 888 aa24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 NMIQ13287 307 aaPredicted RBP24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ZNF772Q68DY9 489 aaPredicted RBP24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 SPRYD3Q8NCJ5 442 aa24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 FSD1Q9BTV5 496 aa24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 CNNM1Q9NRU3 951 aa24.98■■□□□ 1.59
CNTNAP3B-212ENST00000617422 COL24A1Q17RW2 1714 aa24.97■■□□□ 1.59
CNTNAP3B-212ENST00000617422 SPEF2Q9C093 1822 aa24.97■■□□□ 1.59
CNTNAP3B-212ENST00000617422 METTL24Q5JXM2 366 aa24.97■■□□□ 1.59
CNTNAP3B-212ENST00000617422 XAGE2Q96GT9 111 aa24.97■■□□□ 1.59
CNTNAP3B-212ENST00000617422 RGL2O15211 777 aa24.97■■□□□ 1.59
CNTNAP3B-212ENST00000617422 UBR3Q6ZT12 1888 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ABCC12Q96J65 1359 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 A0A0D9SFI3 127 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 RABEP1Q15276 862 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 HSCBQ8IWL3 235 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 SLKQ9H2G2 1235 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms