RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CCDC152Q4G0S7 254 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 EXOC6Q8TAG9 804 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 ZNF622Q969S3 477 aaKnown RBP eCLIP19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 CHMP3Q9Y3E7 222 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 NLGN2Q8NFZ4 835 aa19.56■□□□□ 0.72
PCDHGC3-204ENST00000617222 RPGRQ92834 1020 aaKnown RBP19.56■□□□□ 0.72
PCDHGC3-204ENST00000617222 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
PCDHGC3-204ENST00000617222 SYT17Q9BSW7 474 aa19.56■□□□□ 0.72
PCDHGC3-204ENST00000617222 N4BP2Q86UW6 1770 aaPredicted RBP19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 NPR1P16066 1061 aa19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 GREM2Q9H772 168 aa19.55■□□□□ 0.72
PCDHGC3-204ENST00000617222 KCNA3P22001 575 aa19.54■□□□□ 0.72
PCDHGC3-204ENST00000617222 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
PCDHGC3-204ENST00000617222 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
PCDHGC3-204ENST00000617222 HOXA10P31260 410 aaPredicted RBP19.53■□□□□ 0.72
PCDHGC3-204ENST00000617222 STYK1Q6J9G0 422 aa19.53■□□□□ 0.72
PCDHGC3-204ENST00000617222 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
PCDHGC3-204ENST00000617222 TNRC6CQ9HCJ0 1690 aaKnown RBP19.52■□□□□ 0.72
PCDHGC3-204ENST00000617222 ITGA6P23229 1130 aa19.52■□□□□ 0.72
PCDHGC3-204ENST00000617222 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
PCDHGC3-204ENST00000617222 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.71
PCDHGC3-204ENST00000617222 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 ATP8B2P98198 1209 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 IFIT5Q13325 482 aaKnown RBP19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 CELF1Q92879 486 aaKnown RBP19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
PCDHGC3-204ENST00000617222 NEFLP07196 543 aa19.5■□□□□ 0.71
PCDHGC3-204ENST00000617222 GRAPQ13588 217 aa19.5■□□□□ 0.71
PCDHGC3-204ENST00000617222 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
PCDHGC3-204ENST00000617222 TTLL6Q8N841 843 aa19.5■□□□□ 0.71
PCDHGC3-204ENST00000617222 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
PCDHGC3-204ENST00000617222 RTL9Q8NET4 1388 aa19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 SRGAP3O43295 1099 aa19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 RPS8P62241 208 aaKnown RBP19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 MTX1Q13505 466 aa19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 RPAP2Q8IXW5 612 aaPredicted RBP19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 ZNF594Q96JF6 807 aaPredicted RBP19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 LRP5O75197 1615 aa19.49■□□□□ 0.71
PCDHGC3-204ENST00000617222 PNMA6EA0A0J9YXQ4 647 aa19.48■□□□□ 0.71
PCDHGC3-204ENST00000617222 BBOX1O75936 387 aa19.48■□□□□ 0.71
PCDHGC3-204ENST00000617222 TAF7LQ5H9L4 462 aa19.48■□□□□ 0.71
PCDHGC3-204ENST00000617222 ANKRD18AQ8IVF6 992 aa19.48■□□□□ 0.71
PCDHGC3-204ENST00000617222 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
PCDHGC3-204ENST00000617222 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 AAMPQ13685 434 aa19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 PCDHB15Q9Y5E8 787 aa19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 LAMB2P55268 1798 aa19.47■□□□□ 0.71
PCDHGC3-204ENST00000617222 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
PCDHGC3-204ENST00000617222 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
PCDHGC3-204ENST00000617222 ZNF219Q9P2Y4 722 aaPredicted RBP19.46■□□□□ 0.71
PCDHGC3-204ENST00000617222 BCS1LQ9Y276 419 aa19.46■□□□□ 0.71
PCDHGC3-204ENST00000617222 PPEF1O14829 653 aaPredicted RBP19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 PTPN12Q05209 780 aaKnown RBP19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 POLA2Q14181 598 aa19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 PA2G4Q9UQ80 394 aaKnown RBP19.45■□□□□ 0.7
PCDHGC3-204ENST00000617222 LDHAL6AQ6ZMR3 332 aa19.44■□□□□ 0.7
PCDHGC3-204ENST00000617222 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
PCDHGC3-204ENST00000617222 COL11A2P13942 1736 aaPredicted RBP19.44■□□□□ 0.7
PCDHGC3-204ENST00000617222 HMMRO75330 724 aa19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 COPRSQ9NQ92 184 aa19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 CNNM1Q9NRU3 951 aa19.43■□□□□ 0.7
PCDHGC3-204ENST00000617222 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 C21orf2O43822 256 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 TMC4Q7Z404 712 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 SIL1Q9H173 461 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
PCDHGC3-204ENST00000617222 MYH3P11055 1940 aa19.41■□□□□ 0.7
PCDHGC3-204ENST00000617222 COL4A1P02462 1669 aa19.41■□□□□ 0.7
PCDHGC3-204ENST00000617222 LRRC24Q50LG9 513 aa19.41■□□□□ 0.7
PCDHGC3-204ENST00000617222 TMX4Q9H1E5 349 aaPredicted RBP19.41■□□□□ 0.7
PCDHGC3-204ENST00000617222 EYA2O00167 538 aa19.4■□□□□ 0.7
PCDHGC3-204ENST00000617222 SURF6O75683 361 aaKnown RBP19.4■□□□□ 0.7
PCDHGC3-204ENST00000617222 MINPP1Q9UNW1 487 aa19.4■□□□□ 0.7
PCDHGC3-204ENST00000617222 RIPOR2Q9Y4F9 1068 aa19.4■□□□□ 0.7
PCDHGC3-204ENST00000617222 G3BP1Q13283 466 aaKnown RBP eCLIP19.39■□□□□ 0.69
PCDHGC3-204ENST00000617222 TAF1P21675 1872 aa19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 CHRNDQ07001 517 aa19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 CC2D2BQ6DHV5 1058 aa19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 ATG9AQ7Z3C6 839 aa19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 HELBQ8NG08 1087 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms