RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
PVT1-225ENST00000617087 FAM8A1Q9UBU6 413 aa8.69□□□□□ -1.02
PVT1-225ENST00000617087 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 EREGO14944 169 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 BMP1P13497 986 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 KCNQ4P56696 695 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 ZCCHC2Q9C0B9 1178 aaKnown RBP8.68□□□□□ -1.02
PVT1-225ENST00000617087 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 NPHS2Q9NP85 383 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
PVT1-225ENST00000617087 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
PVT1-225ENST00000617087 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
PVT1-225ENST00000617087 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 UBXN4Q92575 508 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 ACBD3Q9H3P7 528 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
PVT1-225ENST00000617087 DNMT3LQ9UJW3 386 aa8.67□□□□□ -1.02
PVT1-225ENST00000617087 RGS20O76081 388 aa8.66□□□□□ -1.02
PVT1-225ENST00000617087 VEGFBP49765 207 aa8.66□□□□□ -1.02
PVT1-225ENST00000617087 LBRQ14739 615 aaKnown RBP8.66□□□□□ -1.02
PVT1-225ENST00000617087 TAF1CQ15572 869 aaPredicted RBP8.66□□□□□ -1.02
PVT1-225ENST00000617087 CTC1Q2NKJ3 1217 aa8.66□□□□□ -1.02
PVT1-225ENST00000617087 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
PVT1-225ENST00000617087 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 POTECB2RU33 542 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 ST13P50502 369 aaKnown RBP8.65□□□□□ -1.02
PVT1-225ENST00000617087 MEI1Q5TIA1 1274 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 TTC39BQ5VTQ0 682 aaPredicted RBP8.65□□□□□ -1.02
PVT1-225ENST00000617087 NXPE4Q6UWF7 544 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
PVT1-225ENST00000617087 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 CAPN10Q9HC96 672 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
PVT1-225ENST00000617087 EFSO43281 561 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 FAM157BP0CG42 384 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 CES1P23141 567 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 RACK1P63244 317 aaKnown RBP8.64□□□□□ -1.03
PVT1-225ENST00000617087 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
PVT1-225ENST00000617087 EFHC2Q5JST6 749 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 HS2ST1Q7LGA3 356 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 ZNF654Q8IZM8 581 aa8.64□□□□□ -1.03
PVT1-225ENST00000617087 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
PVT1-225ENST00000617087 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
PVT1-225ENST00000617087 SASH3O75995 380 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 THBS1P07996 1170 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 TNNI2P48788 182 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 SFSWAPQ12872 951 aaKnown RBP8.63□□□□□ -1.03
PVT1-225ENST00000617087 ZNF394Q53GI3 561 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 GMLQ99445 158 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
PVT1-225ENST00000617087 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
PVT1-225ENST00000617087 DGAT1O75907 488 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
PVT1-225ENST00000617087 CCINQ13939 588 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
PVT1-225ENST00000617087 GRM2Q14416 872 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 FIGNL1Q6PIW4 674 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 USP48Q86UV5 1035 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 GLIS3Q8NEA6 775 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 PCDHGB7Q9Y5F8 929 aa8.62□□□□□ -1.03
PVT1-225ENST00000617087 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
PVT1-225ENST00000617087 A0A1W2PP55 124 aa8.61□□□□□ -1.03
PVT1-225ENST00000617087 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
PVT1-225ENST00000617087 TARSP26639 723 aaKnown RBP8.61□□□□□ -1.03
PVT1-225ENST00000617087 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
PVT1-225ENST00000617087 OR13H1Q8NG92 308 aa8.61□□□□□ -1.03
PVT1-225ENST00000617087 TANGO6Q9C0B7 1094 aa8.61□□□□□ -1.03
PVT1-225ENST00000617087 SALL4Q9UJQ4 1053 aa8.61□□□□□ -1.03
PVT1-225ENST00000617087 PCDHGC4Q9Y5F7 938 aa8.61□□□□□ -1.03
PVT1-225ENST00000617087 AXIN1O15169 862 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 MMP20O60882 483 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 EDN3P14138 238 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 GSTT1P30711 240 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 PEAR1Q5VY43 1037 aaPredicted RBP8.6□□□□□ -1.03
PVT1-225ENST00000617087 ERMP1Q7Z2K6 904 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 LATS2Q9NRM7 1088 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 TRAK1Q9UPV9 953 aa8.6□□□□□ -1.03
PVT1-225ENST00000617087 TNP2Q05952 138 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 PPP4R2Q9NY27 417 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 INPP5FQ9Y2H2 1132 aa8.59□□□□□ -1.03
PVT1-225ENST00000617087 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 KHNYNO15037 678 aaKnown RBP8.58□□□□□ -1.04
PVT1-225ENST00000617087 MAN1A2O60476 641 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 PKDCCQ504Y2 493 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
PVT1-225ENST00000617087 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 NOC4LQ9BVI4 516 aaKnown RBP8.58□□□□□ -1.04
PVT1-225ENST00000617087 EHD4Q9H223 541 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms