RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 GPTP24298 496 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 AK7Q96M32 723 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
LINC00598-207ENST00000616706 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
LINC00598-207ENST00000616706 A0A087WZG4 1122 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 PLSCR1O15162 318 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 PTMSP20962 102 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
LINC00598-207ENST00000616706 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
LINC00598-207ENST00000616706 ZDHHC9Q9Y397 364 aa12.55□□□□□ -0.4
LINC00598-207ENST00000616706 PHF14O94880 888 aa12.54□□□□□ -0.4
LINC00598-207ENST00000616706 AACSQ86V21 672 aa12.54□□□□□ -0.4
LINC00598-207ENST00000616706 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
LINC00598-207ENST00000616706 COL15A1P39059 1388 aa12.54□□□□□ -0.4
LINC00598-207ENST00000616706 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 MCM2P49736 904 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 CUL4AQ13619 759 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 CWC27Q6UX04 472 aaKnown RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
LINC00598-207ENST00000616706 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
LINC00598-207ENST00000616706 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.4
LINC00598-207ENST00000616706 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.4
LINC00598-207ENST00000616706 GPATCH3Q96I76 525 aa12.52□□□□□ -0.4
LINC00598-207ENST00000616706 SIL1Q9H173 461 aa12.52□□□□□ -0.4
LINC00598-207ENST00000616706 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.4
LINC00598-207ENST00000616706 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
LINC00598-207ENST00000616706 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
LINC00598-207ENST00000616706 ZPR1O75312 459 aa12.52□□□□□ -0.41
LINC00598-207ENST00000616706 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
LINC00598-207ENST00000616706 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
LINC00598-207ENST00000616706 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
LINC00598-207ENST00000616706 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
LINC00598-207ENST00000616706 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
LINC00598-207ENST00000616706 LY75O60449 1722 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 H7C1W4 665 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 RFC4P35249 363 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
LINC00598-207ENST00000616706 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
LINC00598-207ENST00000616706 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
LINC00598-207ENST00000616706 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 PANK2Q9BZ23 570 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 DIAPH3Q9NSV4 1193 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 TTC14Q96N46 770 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 LMBRD1Q9NUN5 540 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
LINC00598-207ENST00000616706 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
LINC00598-207ENST00000616706 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 CASP7P55210 303 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 PTH1RQ03431 593 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
LINC00598-207ENST00000616706 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 UBN2Q6ZU65 1347 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 PTPN12Q05209 780 aaKnown RBP12.49□□□□□ -0.41
LINC00598-207ENST00000616706 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
LINC00598-207ENST00000616706 RUFY2Q8WXA3 655 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
LINC00598-207ENST00000616706 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
LINC00598-207ENST00000616706 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
LINC00598-207ENST00000616706 MRE11P49959 708 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 DEFB132Q7Z7B7 95 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms