RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.53
NOP56-220ENST00000616692 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
NOP56-220ENST00000616692 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
NOP56-220ENST00000616692 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
NOP56-220ENST00000616692 TSPAN18Q96SJ8 248 aa18.32■□□□□ 0.52
NOP56-220ENST00000616692 TRIM66O15016 1216 aa18.32■□□□□ 0.52
NOP56-220ENST00000616692 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
NOP56-220ENST00000616692 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
NOP56-220ENST00000616692 GBP4Q96PP9 640 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 SETDB1Q15047 1291 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 SYCP1Q15431 976 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
NOP56-220ENST00000616692 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 KIF18AQ8NI77 898 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 PIBF1Q8WXW3 757 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 CRBNQ96SW2 442 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 DIAPH3Q9NSV4 1193 aa18.31■□□□□ 0.52
NOP56-220ENST00000616692 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 TPM3P06753 285 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 INHBEP58166 350 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 SYT10Q6XYQ8 523 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.522e-13■■□□□ 12.8
NOP56-220ENST00000616692 ANKRD26Q9UPS8 1709 aa18.3■□□□□ 0.52
NOP56-220ENST00000616692 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
NOP56-220ENST00000616692 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
NOP56-220ENST00000616692 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
NOP56-220ENST00000616692 KDM4AO75164 1064 aa18.29■□□□□ 0.52
NOP56-220ENST00000616692 ZNF445P59923 1031 aa18.29■□□□□ 0.52
NOP56-220ENST00000616692 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
NOP56-220ENST00000616692 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
NOP56-220ENST00000616692 PAX7P23759 505 aa18.28■□□□□ 0.52
NOP56-220ENST00000616692 MAP2K2P36507 400 aa18.28■□□□□ 0.52
NOP56-220ENST00000616692 TTC31Q49AM3 519 aaPredicted RBP18.28■□□□□ 0.52
NOP56-220ENST00000616692 PALLDQ8WX93 1383 aa18.28■□□□□ 0.52
NOP56-220ENST00000616692 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
NOP56-220ENST00000616692 ANKRD33BA6NCL7 494 aa18.27■□□□□ 0.52
NOP56-220ENST00000616692 MKL1Q969V6 931 aa18.27■□□□□ 0.52
NOP56-220ENST00000616692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
NOP56-220ENST00000616692 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
NOP56-220ENST00000616692 NCBP1Q09161 790 aaKnown RBP18.27■□□□□ 0.52
NOP56-220ENST00000616692 ANKRD20A12PQ8NF67 263 aa18.27■□□□□ 0.52
NOP56-220ENST00000616692 NLGN2Q8NFZ4 835 aa18.27■□□□□ 0.52
NOP56-220ENST00000616692 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
NOP56-220ENST00000616692 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
NOP56-220ENST00000616692 CCDC97Q96F63 343 aaPredicted RBP18.26■□□□□ 0.51
NOP56-220ENST00000616692 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
NOP56-220ENST00000616692 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
NOP56-220ENST00000616692 ZSCAN26Q16670 478 aa18.26■□□□□ 0.51
NOP56-220ENST00000616692 KAT6BQ8WYB5 2073 aa18.25■□□□□ 0.51
NOP56-220ENST00000616692 SEC24BO95487 1268 aa18.25■□□□□ 0.51
NOP56-220ENST00000616692 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
NOP56-220ENST00000616692 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
NOP56-220ENST00000616692 SUGP1Q8IWZ8 645 aaKnown RBP18.25■□□□□ 0.51
NOP56-220ENST00000616692 FAM53CQ9NYF3 392 aa18.25■□□□□ 0.51
NOP56-220ENST00000616692 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
NOP56-220ENST00000616692 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
NOP56-220ENST00000616692 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
NOP56-220ENST00000616692 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.25■□□□□ 0.51
NOP56-220ENST00000616692 ADCY9O60503 1353 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 SSFA2P28290 1259 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 E2F4Q16254 413 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 MCTP2Q6DN12 878 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 YBX3P16989 372 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■□□□□ 10.3
NOP56-220ENST00000616692 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 RBSNQ9H1K0 784 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 SPTLC3Q9NUV7 552 aa18.24■□□□□ 0.51
NOP56-220ENST00000616692 CICQ96RK0 1608 aaPredicted RBP18.24■□□□□ 0.51
NOP56-220ENST00000616692 ITGB4P16144 1822 aa18.23■□□□□ 0.51
NOP56-220ENST00000616692 SCP2P22307 547 aa18.23■□□□□ 0.51
NOP56-220ENST00000616692 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
NOP56-220ENST00000616692 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
NOP56-220ENST00000616692 CYP27B1O15528 508 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
NOP56-220ENST00000616692 HSP90AB2PQ58FF8 381 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 TXLNBQ8N3L3 684 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 AK7Q96M32 723 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 LCMT1Q9UIC8 334 aa18.22■□□□□ 0.51
NOP56-220ENST00000616692 CAND2O75155 1236 aa18.21■□□□□ 0.51
NOP56-220ENST00000616692 KLHL40Q2TBA0 621 aa18.21■□□□□ 0.51
NOP56-220ENST00000616692 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
NOP56-220ENST00000616692 KCNQ4P56696 695 aa18.21■□□□□ 0.51
NOP56-220ENST00000616692 FAM177A1Q8N128 213 aaPredicted RBP18.21■□□□□ 0.51
NOP56-220ENST00000616692 SUDS3Q9H7L9 328 aaPredicted RBP18.21■□□□□ 0.51
NOP56-220ENST00000616692 ATP10DQ9P241 1426 aa18.21■□□□□ 0.5
NOP56-220ENST00000616692 JAKMIP3Q5VZ66 844 aa18.2■□□□□ 0.5
NOP56-220ENST00000616692 PACS2Q86VP3 889 aa18.2■□□□□ 0.5
NOP56-220ENST00000616692 UVSSAQ2YD98 709 aa18.19■□□□□ 0.5
NOP56-220ENST00000616692 FBLN1P23142 703 aa18.19■□□□□ 0.5
NOP56-220ENST00000616692 SRLQ86TD4 932 aa18.19■□□□□ 0.5
NOP56-220ENST00000616692 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
NOP56-220ENST00000616692 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
NOP56-220ENST00000616692 CWC15Q9P013 229 aaKnown RBP18.19■□□□□ 0.5
NOP56-220ENST00000616692 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
NOP56-220ENST00000616692 CEP89Q96ST8 783 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms