RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 CDR1P51861 262 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 FAM193AP78312 1265 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 ATP2B2Q01814 1243 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 PKP1Q13835 747 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 ZHX3Q9H4I2 956 aa12.59□□□□□ -0.39
PCDHGB6-202ENST00000616430 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.39
PCDHGB6-202ENST00000616430 CHRNA2Q15822 529 aa12.58□□□□□ -0.39
PCDHGB6-202ENST00000616430 CCDC181Q5TID7 509 aa12.58□□□□□ -0.39
PCDHGB6-202ENST00000616430 CASQ1P31415 396 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 CHST3Q7LGC8 479 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 ABCC4O15439 1325 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 CCDC171Q6TFL3 1326 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 METAP2P50579 478 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 TMEM67Q5HYA8 995 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 KIAA1328Q86T90 577 aa12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB6-202ENST00000616430 KIF5CO60282 957 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 SSBP05455 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 CHAMP1Q96JM3 812 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 SGSM2O43147 1006 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 SYKP43405 635 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 ANTXR1Q9H6X2 564 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 ERVK-7P63135 1459 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 CT47A1Q5JQC4 288 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
PCDHGB6-202ENST00000616430 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 SLC26A6Q9BXS9 759 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 HOXC9P31274 260 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 USP19O94966 1318 aa12.56□□□□□ -0.4
PCDHGB6-202ENST00000616430 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 UBASH3AP57075 661 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 GNG11P61952 73 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 CCDC150Q8NCX0 1101 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 LMOD1P29536 600 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 KCNG4Q8TDN1 519 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 ATP10AO60312 1499 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 BRD1O95696 1058 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 TOM1O60784 492 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 JAKMIP3Q5VZ66 844 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 ALG1Q9BT22 464 aa12.55□□□□□ -0.4
PCDHGB6-202ENST00000616430 TFCP2Q12800 502 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 LUC7LQ9NQ29 371 aaKnown RBP12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 DNAI1Q9UI46 699 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 RAD50Q92878 1312 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 SLC5A1P13866 664 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 NUP88Q99567 741 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB6-202ENST00000616430 RTL1A6NKG5 1358 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 CENPHQ9H3R5 247 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 SPTLC2O15270 562 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 IL15P40933 162 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 PLA2R1Q13018 1463 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 ZBTB43O43298 467 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 HSPA4P34932 840 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 BMS1Q14692 1282 aaKnown RBP12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
PCDHGB6-202ENST00000616430 PRC1O43663 620 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms