RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 RNF186Q9NXI6 227 aa23.29■■□□□ 1.32
TRAPPC3-209ENST00000616395 MIS18AQ9NYP9 233 aa23.29■■□□□ 1.32
TRAPPC3-209ENST00000616395 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
TRAPPC3-209ENST00000616395 LAMB4A4D0S4 1761 aa23.28■■□□□ 1.32
TRAPPC3-209ENST00000616395 DPP8Q6V1X1 898 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC3-209ENST00000616395 ZNF34Q8IZ26 560 aa23.28■■□□□ 1.32
TRAPPC3-209ENST00000616395 NLRP3Q96P20 1036 aa23.28■■□□□ 1.32
TRAPPC3-209ENST00000616395 ABCC4O15439 1325 aa23.27■■□□□ 1.32
TRAPPC3-209ENST00000616395 KIAA2012Q0VF49 1180 aa23.27■■□□□ 1.32
TRAPPC3-209ENST00000616395 H7C1D1 291 aa23.26■■□□□ 1.31
TRAPPC3-209ENST00000616395 MYL6BP14649 208 aa23.26■■□□□ 1.31
TRAPPC3-209ENST00000616395 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC3-209ENST00000616395 MICALL2Q8IY33 904 aa23.26■■□□□ 1.31
TRAPPC3-209ENST00000616395 CCDC102AQ96A19 550 aa23.26■■□□□ 1.31
TRAPPC3-209ENST00000616395 MPNDQ8N594 471 aa23.25■■□□□ 1.31
TRAPPC3-209ENST00000616395 GBA2Q9HCG7 927 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC3-209ENST00000616395 YDJCA8MPS7 323 aa23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 ZNF157P51786 506 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 KRT26Q7Z3Y9 468 aa23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 PPP1R42Q7Z4L9 355 aa23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 CTU1Q7Z7A3 348 aaKnown RBP23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 C2orf69Q8N8R5 385 aa23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-209ENST00000616395 SAMD7Q7Z3H4 446 aa23.23■■□□□ 1.31
TRAPPC3-209ENST00000616395 SP8Q8IXZ3 490 aa23.23■■□□□ 1.31
TRAPPC3-209ENST00000616395 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
TRAPPC3-209ENST00000616395 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
TRAPPC3-209ENST00000616395 ADM5C9JUS6 153 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 ANP32CO43423 234 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 BBOX1O75936 387 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 EGFRP00533 1210 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 SLC10A5Q5PT55 438 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 CFAP53Q96M91 514 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 CSRNP1Q96S65 589 aa23.21■■□□□ 1.31
TRAPPC3-209ENST00000616395 PARP10Q53GL7 1025 aa23.2■■□□□ 1.3
TRAPPC3-209ENST00000616395 HPS5Q9UPZ3 1129 aa23.2■■□□□ 1.3
TRAPPC3-209ENST00000616395 DPF2Q92785 391 aa23.19■■□□□ 1.3
TRAPPC3-209ENST00000616395 UTP14AQ9BVJ6 771 aaKnown RBP23.19■■□□□ 1.3
TRAPPC3-209ENST00000616395 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
TRAPPC3-209ENST00000616395 SLC10A3P09131 477 aa23.18■■□□□ 1.3
TRAPPC3-209ENST00000616395 EIF4A1P60842 406 aaKnown RBP23.17■■□□□ 1.3
TRAPPC3-209ENST00000616395 MIER1Q8N108 512 aa23.17■■□□□ 1.3
TRAPPC3-209ENST00000616395 DCPSQ96C86 337 aaKnown RBP23.17■■□□□ 1.3
TRAPPC3-209ENST00000616395 PSMD14O00487 310 aa23.16■■□□□ 1.3
TRAPPC3-209ENST00000616395 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-209ENST00000616395 DUOX1Q9NRD9 1551 aa23.16■■□□□ 1.3
TRAPPC3-209ENST00000616395 PNISRQ8TF01 805 aaKnown RBP23.15■■□□□ 1.3
TRAPPC3-209ENST00000616395 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.3
TRAPPC3-209ENST00000616395 AKAP11Q9UKA4 1901 aa23.14■■□□□ 1.3
TRAPPC3-209ENST00000616395 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.3
TRAPPC3-209ENST00000616395 GRAPQ13588 217 aa23.13■■□□□ 1.29
TRAPPC3-209ENST00000616395 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
TRAPPC3-209ENST00000616395 GRAPLQ8TC17 118 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-209ENST00000616395 THUMPD2Q9BTF0 503 aaKnown RBP23.13■■□□□ 1.29
TRAPPC3-209ENST00000616395 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
TRAPPC3-209ENST00000616395 LAMB2P55268 1798 aa23.12■■□□□ 1.29
TRAPPC3-209ENST00000616395 PKN2Q16513 984 aaKnown RBP23.11■■□□□ 1.29
TRAPPC3-209ENST00000616395 WASHC4Q2M389 1173 aa23.11■■□□□ 1.29
TRAPPC3-209ENST00000616395 RASAL3Q86YV0 1011 aa23.11■■□□□ 1.29
TRAPPC3-209ENST00000616395 REM2Q8IYK8 340 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC3-209ENST00000616395 RPS12P25398 132 aaKnown RBP23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 SULF1Q8IWU6 871 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 CDCA5Q96FF9 252 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 KCNQ5Q9NR82 932 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 GGA3Q9NZ52 723 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 HDAC9Q9UKV0 1011 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 ASTN2O75129 1339 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
TRAPPC3-209ENST00000616395 RIMBP2O15034 1052 aa23.09■■□□□ 1.29
TRAPPC3-209ENST00000616395 KIF4BQ2VIQ3 1234 aa23.09■■□□□ 1.29
TRAPPC3-209ENST00000616395 GCC1Q96CN9 775 aa23.09■■□□□ 1.29
TRAPPC3-209ENST00000616395 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
TRAPPC3-209ENST00000616395 POLR2AP24928 1970 aaKnown RBP23.09■■□□□ 1.29
TRAPPC3-209ENST00000616395 NLRP10Q86W26 655 aa23.08■■□□□ 1.29
TRAPPC3-209ENST00000616395 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC3-209ENST00000616395 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
TRAPPC3-209ENST00000616395 PDIA6Q15084 440 aa23.08■■□□□ 1.28
TRAPPC3-209ENST00000616395 TMC4Q7Z404 712 aa23.08■■□□□ 1.28
TRAPPC3-209ENST00000616395 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.28
TRAPPC3-209ENST00000616395 LRRC37AA6NMS7 1700 aa23.07■■□□□ 1.28
TRAPPC3-209ENST00000616395 ECE2O60344 883 aa23.07■■□□□ 1.28
TRAPPC3-209ENST00000616395 TBC1D8O95759 1140 aa23.07■■□□□ 1.28
TRAPPC3-209ENST00000616395 TAF1P21675 1872 aa23.07■■□□□ 1.28
TRAPPC3-209ENST00000616395 DOK7Q18PE1 504 aa23.07■■□□□ 1.28
TRAPPC3-209ENST00000616395 C6orf229H3BNL8 230 aa23.06■■□□□ 1.28
TRAPPC3-209ENST00000616395 ANXA1P04083 346 aa23.06■■□□□ 1.28
TRAPPC3-209ENST00000616395 PROSER3Q2NL68 480 aa23.06■■□□□ 1.28
TRAPPC3-209ENST00000616395 POLLQ9UGP5 575 aa23.06■■□□□ 1.28
TRAPPC3-209ENST00000616395 TRMT112Q9UI30 125 aaKnown RBP23.06■■□□□ 1.28
TRAPPC3-209ENST00000616395 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
TRAPPC3-209ENST00000616395 HABP4Q5JVS0 413 aaKnown RBP23.05■■□□□ 1.28
TRAPPC3-209ENST00000616395 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
TRAPPC3-209ENST00000616395 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
TRAPPC3-209ENST00000616395 GPSM2P81274 684 aa23.03■■□□□ 1.28
TRAPPC3-209ENST00000616395 HSP90AB3PQ58FF7 597 aa23.03■■□□□ 1.28
TRAPPC3-209ENST00000616395 ANGEL2Q5VTE6 544 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms