RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 ABCC4O15439 1325 aa16.19■□□□□ 0.18
CCL4-201ENST00000613947 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
CCL4-201ENST00000613947 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
CCL4-201ENST00000613947 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
CCL4-201ENST00000613947 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
CCL4-201ENST00000613947 CRAMP1Q96RY5 1269 aa16.18■□□□□ 0.18
CCL4-201ENST00000613947 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
CCL4-201ENST00000613947 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
CCL4-201ENST00000613947 LAMB2P55268 1798 aa16.18■□□□□ 0.18
CCL4-201ENST00000613947 SLX4Q8IY92 1834 aa16.17■□□□□ 0.18
CCL4-201ENST00000613947 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
CCL4-201ENST00000613947 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
CCL4-201ENST00000613947 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
CCL4-201ENST00000613947 C21orf2O43822 256 aa16.16■□□□□ 0.18
CCL4-201ENST00000613947 CTSWP56202 376 aa16.16■□□□□ 0.18
CCL4-201ENST00000613947 INTS3Q68E01 1043 aaKnown RBP16.16■□□□□ 0.18
CCL4-201ENST00000613947 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
CCL4-201ENST00000613947 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
CCL4-201ENST00000613947 UTYO14607 1347 aa16.16■□□□□ 0.18
CCL4-201ENST00000613947 CCDC152Q4G0S7 254 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
CCL4-201ENST00000613947 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 PLIN1O60240 522 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 RLBP1P12271 317 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 SEC31BQ9NQW1 1179 aa16.15■□□□□ 0.18
CCL4-201ENST00000613947 ARFGEF1Q9Y6D6 1849 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 TAF1P21675 1872 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 FOXO4P98177 505 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 GRAPQ13588 217 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
CCL4-201ENST00000613947 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
CCL4-201ENST00000613947 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
CCL4-201ENST00000613947 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
CCL4-201ENST00000613947 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
CCL4-201ENST00000613947 CSF1RP07333 972 aa16.13■□□□□ 0.17
CCL4-201ENST00000613947 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
CCL4-201ENST00000613947 GREM2Q9H772 168 aa16.13■□□□□ 0.17
CCL4-201ENST00000613947 MYH3P11055 1940 aa16.13■□□□□ 0.17
CCL4-201ENST00000613947 BBOX1O75936 387 aa16.13■□□□□ 0.17
CCL4-201ENST00000613947 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
CCL4-201ENST00000613947 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
CCL4-201ENST00000613947 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
CCL4-201ENST00000613947 MEIS3Q99687 375 aa16.12■□□□□ 0.17
CCL4-201ENST00000613947 COL4A1P02462 1669 aa16.11■□□□□ 0.17
CCL4-201ENST00000613947 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
CCL4-201ENST00000613947 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
CCL4-201ENST00000613947 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
CCL4-201ENST00000613947 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
CCL4-201ENST00000613947 CHMP3Q9Y3E7 222 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 ITGA6P23229 1130 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
CCL4-201ENST00000613947 NFKBIEO00221 500 aa16.09■□□□□ 0.17
CCL4-201ENST00000613947 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
CCL4-201ENST00000613947 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
CCL4-201ENST00000613947 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
CCL4-201ENST00000613947 MS4A1P11836 297 aa16.08■□□□□ 0.17
CCL4-201ENST00000613947 RASSF7Q02833 373 aa16.08■□□□□ 0.17
CCL4-201ENST00000613947 RABL6Q3YEC7 729 aaPredicted RBP16.08■□□□□ 0.17
CCL4-201ENST00000613947 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.17
CCL4-201ENST00000613947 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.17
CCL4-201ENST00000613947 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.17
CCL4-201ENST00000613947 GNAI3P08754 354 aa16.08■□□□□ 0.16
CCL4-201ENST00000613947 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
CCL4-201ENST00000613947 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
CCL4-201ENST00000613947 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
CCL4-201ENST00000613947 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
CCL4-201ENST00000613947 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
CCL4-201ENST00000613947 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
CCL4-201ENST00000613947 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
CCL4-201ENST00000613947 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
CCL4-201ENST00000613947 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
CCL4-201ENST00000613947 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
CCL4-201ENST00000613947 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
CCL4-201ENST00000613947 PRELPP51888 382 aa16.06■□□□□ 0.16
CCL4-201ENST00000613947 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
CCL4-201ENST00000613947 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
CCL4-201ENST00000613947 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
CCL4-201ENST00000613947 FER1L6Q2WGJ9 1857 aa16.06■□□□□ 0.16
CCL4-201ENST00000613947 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
CCL4-201ENST00000613947 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
CCL4-201ENST00000613947 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
CCL4-201ENST00000613947 BSDC1Q9NW68 430 aaPredicted RBP16.05■□□□□ 0.16
CCL4-201ENST00000613947 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
CCL4-201ENST00000613947 CHD4Q14839 1912 aa16.05■□□□□ 0.16
CCL4-201ENST00000613947 MVPQ14764 893 aaKnown RBP16.05■□□□□ 0.16
CCL4-201ENST00000613947 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
CCL4-201ENST00000613947 GNAI2P04899 355 aa16.04■□□□□ 0.16
CCL4-201ENST00000613947 RRP1P56182 461 aaKnown RBP16.04■□□□□ 0.16
CCL4-201ENST00000613947 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCL4-201ENST00000613947 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
CCL4-201ENST00000613947 MPNDQ8N594 471 aa16.04■□□□□ 0.16
CCL4-201ENST00000613947 PSMD1Q99460 953 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms