RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 LRRC24Q50LG9 513 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 RBSNQ9H1K0 784 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 MED23Q9ULK4 1368 aa23.72■■□□□ 1.39
SMARCD2-212ENST00000613943 ASAP1Q9ULH1 1129 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 TPCN1Q9ULQ1 816 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 NKX1-1Q15270 411 aaPredicted RBP23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 ATG9AQ7Z3C6 839 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 PLEKHG2Q9H7P9 1386 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 STRCQ7RTU9 1775 aa23.71■■□□□ 1.39
SMARCD2-212ENST00000613943 LAMB4A4D0S4 1761 aa23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 GJB2P29033 226 aa23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 USP48Q86UV5 1035 aa23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 CNPY2Q9Y2B0 182 aa23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 STX6O43752 255 aa23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.7■■□□□ 1.38
SMARCD2-212ENST00000613943 ERBB4Q15303 1308 aa23.69■■□□□ 1.38
SMARCD2-212ENST00000613943 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
SMARCD2-212ENST00000613943 TAF5LO75529 589 aa23.68■■□□□ 1.38
SMARCD2-212ENST00000613943 TM6SF1Q9BZW5 370 aa23.68■■□□□ 1.38
SMARCD2-212ENST00000613943 TMOD3Q9NYL9 352 aa23.68■■□□□ 1.38
SMARCD2-212ENST00000613943 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
SMARCD2-212ENST00000613943 ZNF609O15014 1411 aa23.67■■□□□ 1.38
SMARCD2-212ENST00000613943 ZSCAN22P10073 491 aaPredicted RBP23.67■■□□□ 1.38
SMARCD2-212ENST00000613943 BTG4Q9NY30 223 aa23.67■■□□□ 1.38
SMARCD2-212ENST00000613943 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
SMARCD2-212ENST00000613943 DNAJC10Q8IXB1 793 aa23.67■■□□□ 1.38
SMARCD2-212ENST00000613943 PIGBQ92521 554 aa23.66■■□□□ 1.38
SMARCD2-212ENST00000613943 GOLIM4O00461 696 aa23.66■■□□□ 1.38
SMARCD2-212ENST00000613943 STK3Q13188 491 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 BLOC1S2Q6QNY1 142 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 HAUS7Q99871 368 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 SHANK3Q9BYB0 1731 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 UBR2Q8IWV8 1755 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 SYNE4Q8N205 404 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 CCDC191Q8NCU4 936 aa23.65■■□□□ 1.38
SMARCD2-212ENST00000613943 FIBPO43427 364 aa23.64■■□□□ 1.38
SMARCD2-212ENST00000613943 MBD3O95983 291 aa23.64■■□□□ 1.38
SMARCD2-212ENST00000613943 RNF214Q8ND24 703 aa23.64■■□□□ 1.38
SMARCD2-212ENST00000613943 FAM89AQ96GI7 184 aa23.64■■□□□ 1.38
SMARCD2-212ENST00000613943 VPS37CA5D8V6 355 aaPredicted RBP23.64■■□□□ 1.37
SMARCD2-212ENST00000613943 F13A1P00488 732 aa23.64■■□□□ 1.37
SMARCD2-212ENST00000613943 TRIM44Q96DX7 344 aaPredicted RBP23.64■■□□□ 1.37
SMARCD2-212ENST00000613943 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
SMARCD2-212ENST00000613943 TCHHQ07283 1943 aa23.63■■□□□ 1.37
SMARCD2-212ENST00000613943 ABCA3Q99758 1704 aa23.63■■□□□ 1.37
SMARCD2-212ENST00000613943 RNF20Q5VTR2 975 aa23.63■■□□□ 1.37
SMARCD2-212ENST00000613943 PSMA5P28066 241 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 TOB2Q14106 344 aaPredicted RBP23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 LRSAM1Q6UWE0 723 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 MTMR6Q9Y217 621 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 RPS6KB1P23443 525 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 TJP1Q07157 1748 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
SMARCD2-212ENST00000613943 SH2B1Q9NRF2 756 aaPredicted RBP23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 A0A0G2JLW4 131 aa23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 EYA2O00167 538 aa23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 DNM1Q05193 864 aaKnown RBP23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 ZSCAN31Q96LW9 406 aaPredicted RBP23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 LRRC2Q9BYS8 371 aa23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 ATG3Q9NT62 314 aa23.61■■□□□ 1.37
SMARCD2-212ENST00000613943 JCADQ9P266 1359 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 A0A1B0GUL7 405 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 GPTP24298 496 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 SYTL4Q96C24 671 aaPredicted RBP23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 PAG1Q9NWQ8 432 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 CYP21A2P08686 494 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 IL15P40933 162 aaPredicted RBP23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 FERMT3Q86UX7 667 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 KBTBD3Q8NAB2 608 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 PAPPAQ13219 1627 aa23.6■■□□□ 1.37
SMARCD2-212ENST00000613943 MCMDC2Q4G0Z9 681 aa23.59■■□□□ 1.37
SMARCD2-212ENST00000613943 FAM173BQ6P4H8 233 aa23.59■■□□□ 1.37
SMARCD2-212ENST00000613943 ISCA1Q9BUE6 129 aa23.59■■□□□ 1.37
SMARCD2-212ENST00000613943 CCDC173Q0VFZ6 552 aa23.59■■□□□ 1.37
SMARCD2-212ENST00000613943 TCIRG1Q13488 830 aa23.59■■□□□ 1.37
SMARCD2-212ENST00000613943 ESPNB1AK53 854 aa23.58■■□□□ 1.37
SMARCD2-212ENST00000613943 HLFQ16534 295 aa23.58■■□□□ 1.37
SMARCD2-212ENST00000613943 ADORA1P30542 326 aa23.58■■□□□ 1.36
SMARCD2-212ENST00000613943 USPL1Q5W0Q7 1092 aa23.58■■□□□ 1.36
SMARCD2-212ENST00000613943 CDC37L1Q7L3B6 337 aa23.58■■□□□ 1.36
SMARCD2-212ENST00000613943 ANP32BQ92688 251 aaKnown RBP23.58■■□□□ 1.36
SMARCD2-212ENST00000613943 KAT6BQ8WYB5 2073 aa23.57■■□□□ 1.36
SMARCD2-212ENST00000613943 SLC4A9Q96Q91 983 aa23.57■■□□□ 1.36
SMARCD2-212ENST00000613943 CCDC57Q2TAC2 916 aa23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 PPP1R9BQ96SB3 815 aa23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 HMG20BQ9P0W2 317 aa23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 IFIT1P09914 478 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 FKBP4Q02790 459 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 LARP1BQ659C4 914 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 STOX1Q6ZVD7 989 aa23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 NEK1Q96PY6 1258 aa23.56■■□□□ 1.36
SMARCD2-212ENST00000613943 KIF6Q6ZMV9 814 aa23.55■■□□□ 1.36
SMARCD2-212ENST00000613943 JAK2O60674 1132 aa23.54■■□□□ 1.36
SMARCD2-212ENST00000613943 A0A0G2JS52 829 aa23.54■■□□□ 1.36
SMARCD2-212ENST00000613943 TSGA10IPQ3SY00 556 aa23.54■■□□□ 1.36
SMARCD2-212ENST00000613943 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms