RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TMX3Q96JJ7 454 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 TTC14Q96N46 770 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC172P0C7W6 258 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 SLC5A1P13866 664 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC155Q8N6L0 562 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 CTAGE1Q96RT6 745 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 RAB34Q9BZG1 259 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 EVCP57679 992 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 KANK3Q6NY19 840 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 UBASH3AP57075 661 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 TYRO3Q06418 890 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 CWC27Q6UX04 472 aaKnown RBP7.86□□□□□ -1.15
CLCN3-211ENST00000613795 VPS36Q86VN1 386 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 RBBP5Q15291 538 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SYT10Q6XYQ8 523 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 INTS4Q96HW7 963 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 IFT74Q96LB3 600 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 C14orf93Q9H972 538 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 LUC7L2Q9Y383 392 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 NUCB1Q02818 461 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 TRAF1Q13077 416 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SAMD1Q6SPF0 538 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 LRRC27Q9C0I9 530 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SEC63Q9UGP8 760 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SYT1P21579 422 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 ARHGAP45Q92619 1136 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 TSG101Q99816 390 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 ATP2C2O75185 946 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 OAS2P29728 719 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 CETN2P41208 172 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 MAP3K12Q12852 859 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 TMX1Q9H3N1 280 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 GOPCQ9HD26 462 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SPATS2LQ9NUQ6 558 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 DBF4Q9UBU7 674 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 UGGT2Q9NYU1 1516 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 SHANK2Q9UPX8 1470 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 PIK3R4Q99570 1358 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 KDM5BQ9UGL1 1544 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 WDHD1O75717 1129 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 TTC22Q5TAA0 569 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 PPFIBP2Q8ND30 876 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 CNNM3Q8NE01 707 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
CLCN3-211ENST00000613795 VCXQ9H320 206 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 JADE2Q9NQC1 790 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 LRP2BPQ9P2M1 347 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 PHF8Q9UPP1 1060 aa7.85□□□□□ -1.15
CLCN3-211ENST00000613795 ATP8B1O43520 1251 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 BUB1BO60566 1050 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 PPP2R3AQ06190 1150 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 IFI16Q16666 785 aaKnown RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC38Q502W7 563 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 CFAP57Q96MR6 1250 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 HMG20BQ9P0W2 317 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 PLCH2O75038 1416 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 ZPR1O75312 459 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 ATP11AP98196 1134 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 SH2D4BQ5SQS7 431 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 FEZ2Q9UHY8 353 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 FSD2A1L4K1 749 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 KIF4AO95239 1232 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 GCKP35557 465 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 CYLC1P35663 651 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 SPTY2D1Q68D10 685 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 EVI5LQ96CN4 794 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 F13A1P00488 732 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 MYL6BP14649 208 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 ELF2Q15723 593 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 METTL24Q5JXM2 366 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 CPLX4Q7Z7G2 160 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 SAMD15Q9P1V8 674 aa7.84□□□□□ -1.15
CLCN3-211ENST00000613795 URB2Q14146 1524 aaKnown RBP7.84□□□□□ -1.15
CLCN3-211ENST00000613795 FAM177BA6PVY3 158 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 RAPGEF3O95398 923 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 LDHCP07864 332 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 PPP4R3AQ6IN85 833 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 CNPY2Q9Y2B0 182 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 ZNF518AQ6AHZ1 1483 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 ELP1O95163 1332 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 ANKRD18BA2A2Z9 1011 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 NDUFAB1O14561 156 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 SLC8A1P32418 973 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLCN3-211ENST00000613795 PRPF40BQ6NWY9 871 aaKnown RBP7.83□□□□□ -1.16
CLCN3-211ENST00000613795 GBP1P32455 592 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 ZNF76P36508 570 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 SPAG1Q07617 926 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 CACNA2D4Q7Z3S7 1137 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 C8orf76Q96K31 380 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 GSTO1P78417 241 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 TMEM266Q2M3C6 531 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 STIM2Q9P246 746 aa7.83□□□□□ -1.16
CLCN3-211ENST00000613795 IMPACTQ9P2X3 320 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms